Job Description P77735 Confidence 100.00% Date Thu Jan 5 12:32:17 GMT 2012 Rank 38 Aligned Residues 264 % Identity 25% Template c1vbjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin f synthase; PDBTitle: the crystal structure of prostaglandin f synthase from2 trypanosoma brucei Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	Y	N	P	L	G	K	T	D	L	R	V	S	R	L	C	L	G	C	M	T	F	G	E	P	D	R	G	N	H	A	W	T	L	P	E	E	S	S	R	P	I	I	K	R	A	L	E	G	G	I	N	F	F	D	T	A	N	S	Y	S	D	G	S	S	E	E	I	V	G	R	A	L	R	D	F	A	R	R
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		L	T	Q	S	L	K	L	S	N	G	V	M	M	P	V	L	G	F	G	M	W	K	L	Q	.	.	.	.	.	.	.	.	.	.	.	D	G	N	E	A	E	T	A	T	M	W	A	I	K	S	G	Y	R	H	I	D	T	A	A	I	Y	K	N	E	E	S	A	G	R	A	I	A	S	C	G	.	.	V	P	R
Template Known Secondary structure									T	T	S					S	B					T	T			.	.	.	.	.	.	.	.	.	.	.	T	T												T	T	T								G	G	G	T												S	S	.	.	S		G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	V	V	V	A	T	K	V	F	H	R	V	G	D	L	P	E	G	L	S	R	A	Q	I	L	R	S	I	D	D	S	L	R	R	L	G	M	D	Y	V	D	I	L	Q	I	H	R	W	D	Y	N	T	P	I	E	E	T	L	E	A	L	N	D	V	V	K	A	G	K	A	R	Y	I	G	A	S	S	M	H
Query Conservation
Alig confidence																.	.	.	.	.	.																															.
Template Conservation																.	.	.	.	.	.																															.
Template Sequence		E	E	L	F	V	T	T	K	L	W	N	S	D	Q	.	.	.	.	.	.	G	Y	E	S	T	L	S	A	F	E	K	S	I	K	K	L	G	L	E	Y	V	D	L	Y	L	I	H	W	P	G	.	K	D	K	F	I	D	T	W	K	A	F	E	K	L	Y	A	D	K	K	V	R	A	I	G	V	S	N	F	H
Template Known Secondary structure		G	G									G	G	G		.	.	.	.	.	.	S															T	T		S								S			T	.	T	T	T														T	T	S								S
Template Predicted Secondary structure																.	.	.	.	.	.																															.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Q	F	A	Q	A	L	E	L	Q	K	Q	H	G	W	A	Q	F	V	S	M	Q	D	H	Y	N	L	I	Y	R	E	E	E	R	E	M	L	P	L	C	Y	Q	E	G	V	A	V	I	P	W	S	P	L	A	R	G	R	L	T	R	P	W	G	E	T	T	A	R	L	V	S	D	E	V	G	K	N	L	Y
Query Conservation
Alig confidence											.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	H	I	E	E	L	L	K	.	.	.	.	.	.	H	C	K	V	A	P	M	V	N	Q	I	E	L	H	P	L	L	N	Q	K	A	L	C	E	Y	C	K	S	K	N	I	A	V	T	A	W	S	P	L	G	Q	G	H	L	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	.	.	.	.	.	.	S		S	S										B	T	T	B												T	T							S	T	T	G	G	G	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	S	D	E	N	D	A	Q	I	A	E	R	L	T	G	V	S	E	E	L	G	A	T	R	A	Q	V	A	L	A	W	L	L	S	K	P	G	I	A	A	P	I	I	G	T	S	R	E	E	Q	L	D	E	L	L	N	A	V	D	I	T	L	K	P	E	Q	I	A	E	L	E	T	P	Y	K	P	H	P	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																														.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	A	R	L	K	A	I	G	G	K	Y	G	K	T	A	A	Q	V	M	L	R	W	E	I	Q	A	G	V	I	.	.	T	I	P	K	S	G	N	E	A	R	I	K	E	N	G	N	I	F	D	F	E	L	T	A	E	D	I	Q	V	I	D	G	M	N	A	G	H	R	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										T	T	T														T	T			.	.						S												S	S													T	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																														.	.
Template SS confidence
												198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		321
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		266

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions