Job Description P43341 Confidence 98.78% Date Thu Jan 5 12:02:20 GMT 2012 Rank 60 Aligned Residues 211 % Identity 16% Template c3zu0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nad nucleotidase; PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn) Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.																			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	T	L	F	I	A	D	L	H	L	C	V	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	T	A	G	F	L	R	F	L	A	G	E	A	R	K	A	D	A	L	Y	I	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A	A	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.	.	.	.
Template Conservation																																																				.														.	.	.	.	.
Template Sequence		L	S	I	L	H	I	N	D	H	H	S	Y	L	E	P	H	E	T	R	I	N	L	N	G	Q	Q	T	K	V	D	I	G	G	F	S	A	V	N	A	K	L	N	K	L	R	K	K	Y	K	N	.	P	L	V	L	H	A	G	D	A	I	T	G	T	.	.	.	.	.	L	Y	F	T	L	F	G	G	S	A	D
Template Known Secondary structure											T	T			S									T	T																								S	S	S	.							S			S		S	S	.	.	.	.	.					T	T	T	T
Template Predicted Secondary structure																																																				.														.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	A	V	S	D	S	G	V	P	C	Y	F	I	H	G	N	R	D	F	L	L	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	A	R	E	S	G	M	T	L	L	P	E	E	K	V	L	E	L	Y	G	R	R	V	L	I	M	H	G	D	T	L	C	T	D	D
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		A	A	V	M	N	A	G	N	F	H	Y	F	.	T	L	G	N	H	E	F	D	A	G	N	E	G	L	L	K	L	L	E	P	L	K	I	P	V	L	S	A	N	V	I	P	D	K	S	S	I	L	Y	N	K	W	K	P	Y	D	I	F	T	V	D	G	E	K	I	A	I	I	G	L	D	T	V	N	K	T	V
Template Known Secondary structure							T	T	T		S			.				S	G	G	G	T	T										T	T			S					S	S					T	T	S	T	T	T	T	S		B	S							T	T											S
Template Predicted Secondary structure														.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		A	G	Y	Q	A	F	R	A	K	V	H	K	P	W	L	Q	T	L	F	L	A	L	P	L	F	V	R	K	.	.	R	I	A	A	R	M	R	A	N	S	K	E	A	N	S	S	K	S	L	A	I	M	D	V	N	Q	N	A	V	V	S	A	M	E	K	H	Q	V	Q	W	L	I	H	G	H	T	H	R	P	A
Query Conservation																														.	.
Alig confidence																														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	S	S	P	G	K	D	V	K	F	Y	D	E	I	A	T	A	Q	I	M	A	N	A	L	K	Q	Q	G	I	N	K	I	I	L	L	S	H	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	N	I	E	I	A	Q	K	V	N	D	I	D	V	I	V	T	G	D	S	H	Y	L	Y
Template Known Secondary structure				S				T	T																			T	T	T										T			.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S								S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230															.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
																			201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	E	L	I	A	N	Q	Q	P	A	F	R	V	V	L	G	A	W	H	T	E	G	S	M	V	K	V	T	A	D	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	D	E	L	R	S	L	K	L	P	V	I	Y	E	Y	P	L	E	F	K	N	P	N	G	E	P	V	F	V	M	E	G	W	A	Y	S	A	V	V	G	D	L	G	V	K	F	S	P
Template Known Secondary structure									T	T							S	S						T	T	S										S	T	T												T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions