Job Description P43341 Confidence 99.86% Date Thu Jan 5 12:02:20 GMT 2012 Rank 11 Aligned Residues 220 % Identity 16% Template c3t1iC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.							.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.															.																																								.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.															.																																								.	.	.	.	.	.	.
Query Sequence		M	A	T	L	F	I	A	D	L	H	L	C	V	.	.	.	.	.	.	E	E	P	A	I	T	A	G	F	L	R	F	L	A	.	G	E	A	R	K	A	D	A	L	Y	I	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A	A	A	I	K	A	V	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.															.																																								.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.															.																							.	.	.															.	.	.	.	.	.	.
Template Conservation																																																										.	.	.
Template Sequence		F	K	I	L	V	A	T	D	I	H	L	G	F	X	E	K	D	A	V	R	G	N	D	T	F	V	T	L	D	E	I	L	R	L	A	Q	E	N	E	V	D	F	I	L	L	G	G	D	L	F	H	E	N	K	P	S	.	.	.	R	K	T	L	H	T	C	L	E	L	L	R	K	Y	C	X	G	D	R	P	V
Template Known Secondary structure												B	T	T	T	S	S		T	T	T	T	T																T	T		S						S		S	B	S	S	S	S			.	.	.																B	S	S	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
												67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	D	S	G	V	P	C	Y	F	I	H	G	N	R	D	F	L	L	G	K	R	F	A	R	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	T	L	L	P	E	E	K	V	L	E	L	Y	G	R	R	V	L	I	M	H	G	D	T	L	C
Query Conservation		.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	E	I	L	S	D	Q	S	N	L	N	I	S	I	P	V	F	S	I	H	G	N	H	D	D	P	T	G	A	D	A	L	C	A	L	D	I	L	S	C	A	G	F	V	N	H	F	G	R	S	X	S	V	E	K	I	D	I	S	P	V	L	L	Q	K	G	S	T	K	I	A	L	Y	G	L	G	S	I	P
Template Known Secondary structure							S	S						B		S								S	S	S			B	T	T	T	T	B										T	S										S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	D	A	G	Y	Q	A	F	R	A	K	V	H	K	P	W	L	Q	T	L	F	L	A	L	P	L	F	V	R	K	R	I	A	A	R	M	R	A	N	S	K	E	A	N	S	S	K	S	L	A	I	M	D	V	N	Q	N	A	V	V	S	A	M	E	K	H	Q	V	Q	W	L	I	H	G	H	T	H	R	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Sequence		D	E	R	L	Y	R	X	F	V	N	K	K	V	.	.	.	.	.	.	.	T	X	L	R	P	K	E	D	E	N	S	W	F	N	L	F	V	I	H	Q	N	R	S	K	H	G	S	T	N	F	I	P	E	Q	F	L	D	.	.	.	.	.	.	.	.	.	D	F	I	D	L	V	I	W	G	H	E	H	E	C
Template Known Secondary structure											T	T			.	.	.	.	.	.	.						S	S		G	G	G									S			S		S	S	S	S	S	S			G	G	G	S		.	.	.	.	.	.	.	.	.	T	T								S			S
Template Predicted Secondary structure															.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.										.	.	.	.	240	.	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	H	E	L	I	A	N	Q	Q	P	A	F	R	V	V	L	G	A	.	.	.	.	.	.	.	.	.	.	.	W	H	T	E	G	S	M	V	K	V	T	A	D	D	V	E	L	I	H	F	P
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	A	P	T	K	N	E	Q	Q	L	F	Y	I	S	Q	P	G	S	S	V	V	T	S	L	S	P	G	E	A	V	K	K	H	V	G	L	L	R	I	K	G	R	K	X	N	X	H	K	I	P
Template Known Secondary structure									T	T	T										S	S			S							S											T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions