Job Description P43341 Confidence 13.51% Date Thu Jan 5 12:02:20 GMT 2012 Rank 100 Aligned Residues 62 % Identity 15% Template c3lmaC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:stage v sporulation protein ad (spovad); PDBTitle: crystal structure of the stage v sporulation protein ad2 (spovad) from bacillus licheniformis. northeast structural3 genomics consortium target bir6. Resolution 1.99 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																			.	.
Query SS confidence																.	.	.	.	.	.																			.	.
Query Sequence		L	F	I	A	D	L	H	L	C	V	E	E	P	A	.	.	.	.	.	.	I	T	A	G	F	L	R	F	L	A	G	E	A	R	K	A	D	A	.	.	L	Y	I	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A	A	A	I	K	A	V	S	D	S	G	V	P	C	Y	F
Query Conservation																.	.	.	.	.	.																			.	.
Alig confidence																.	.	.	.	.	.																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	Y	D	E	X	H	C	N	Q	K	N	W	E	X	A	E	R	K	L	X	E	D	A	V	Q	S	A	L	S	K	Q	N	L	K	K	E	D	I	D	I	F	L	A	G	D	L	L	N	Q	N	V	T	A	N	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	H	L	K	I	P	F	L	C
Template Known Secondary structure					S	S	T	T	T	T	S	S	S																				T	T			G	G	G		S							T	T		S	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.					T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.	.	.	.
		76	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		106	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions