Job Description P43341 Confidence 98.59% Date Thu Jan 5 12:02:20 GMT 2012 Rank 64 Aligned Residues 221 % Identity 16% Template c3jyfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- PDBTitle: the crystal structure of a 2,3-cyclic nucleotide 2-2 phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor3 protein from klebsiella pneumoniae subsp. pneumoniae mgh 78578 Resolution 2.43 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.														.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query Sequence		M	A	T	L	F	I	A	D	L	H	L	C	V	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	T	A	G	F	L	R	F	L	A	G	E	A	R	K	A	D	A	L	Y	I	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	.	.	.	R	K	M	A	A	A	I	K
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																								.	.	.
Template Conservation																																															.
Template Sequence		L	R	I	X	E	T	T	D	L	H	S	N	X	X	D	F	D	Y	Y	K	D	A	A	T	E	K	F	G	L	V	R	T	A	S	L	I	E	Q	A	R	A	E	V	K	N	.	S	V	L	V	D	N	G	D	V	I	Q	G	S	P	L	G	D	Y	X	A	A	K	G	L	K	E	G	D	V	H	P	V	Y	K
Template Known Secondary structure											T	T			S	S			T	T	T	T				S	S																T		S		.							S			S	S	S	S													T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																												.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	S	D	S	G	V	P	C	Y	F	I	H	G	N	R	D	F	L	L	G	K	R	F	A	R	E	S	G	M	T	L	L	P	E	E	K	V	L	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	R	R	V	L	I	M	H	G	D	T
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		A	X	N	T	L	N	Y	A	V	.	G	N	L	G	N	H	E	F	N	Y	G	L	D	F	L	H	K	A	L	A	G	A	K	F	P	Y	V	N	A	N	I	I	D	A	K	T	G	K	P	X	F	T	P	Y	L	I	Q	D	T	R	V	V	D	S	D	G	Q	I	H	T	L	R	I	G	Y	I	G	F	V	P
Template Known Secondary structure				T	T	S			S		.					G	G	G	G	T	T													S	S					S	S				T	T	T	T			S	S													T	T	S
Template Predicted Secondary structure											.
Template SS confidence
		88	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		L	C	T	D	D	A	G	Y	Q	A	F	R	A	K	V	H	.	.	.	.	K	P	W	L	Q	T	L	F	L	A	L	P	L	F	V	R	K	R	I	A	A	R	M	R	A	N	S	K	E	A	N	S	S	K	S	L	A	I	M	D	V	N	Q	N	A	V	V	S	A	M	E	K	H	Q	V	Q	W	L	I	H
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.														.																						.	.	.	.	.
Template Conservation																																			.																						.	.	.	.	.
Template Sequence		P	Q	I	X	T	W	D	K	A	N	L	N	G	K	V	T	V	N	D	I	T	E	T	A	R	K	Y	I	P	E	X	R	A	.	K	G	A	D	V	V	V	V	V	A	H	S	G	L	S	A	D	P	Y	Q	A	.	.	.	.	.	X	A	E	N	S	V	Y	Y	L	S	Q	V	P	G	V	D	A	I	X	F
Template Known Secondary structure		T	T					T					T	T	T																				.	T	T		S													S				T	.	.	.	.	.	T		S							T	T	S	T	T
Template Predicted Secondary structure																																			.																						.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.											210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	T	H	R	P	A	V	H	E	L	I	A	N	Q	Q	.	.	.	.	.	.	.	.	.	.	P	A	F	R	V	V	L	G	A	W	H	T	E	G	S	M	V	K	V	T
Query Conservation																		.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	A	H	A	V	F	P	G	K	D	F	A	N	I	K	G	A	D	I	A	K	G	T	L	N	G	V	P	A	V	X	P	G	X	W	G	D	H	L	G	V	V	D	L	V
Template Known Secondary structure			S	S					S	S	G	G	G	T	T	S	T	T			T	T	T	T			T	T								S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions