Job Description P43341 Confidence 97.59% Date Thu Jan 5 12:02:20 GMT 2012 Rank 66 Aligned Residues 117 % Identity 10% Template c3floG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase alpha subunit b; PDBTitle: crystal structure of the carboxyl-terminal domain of yeast2 dna polymerase alpha in complex with its b subunit Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	T	L	F	I	A	D	L	H	L	C	V	E	E	.	.	P	A	I	T	A	G	F	L	R	F	L	A	G	E	A	R	K	A	D	A	L	Y	I	L	G	D	L	F	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A	A	A
Query Conservation																	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.
Template Sequence		L	K	V	I	V	T	C	G	P	Y	F	A	N	D	N	F	S	L	E	L	L	Q	E	F	I	D	S	I	N	N	.	E	V	K	P	H	V	L	I	M	F	G	P	F	I	D	I	T	H	P	L	I	A	S	G	K	L	P	N	F	P	Q	F	K	T	Q	P	K	T	L	D	E	L	F	L	K	L	F	T	P
Template Known Secondary structure									S			S		T	T																	.	T	T			S						S		S	S	B	T	T	S						T						T	T		S	S			S	S									T
Template Predicted Secondary structure																																.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.													.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	A	V	S	D	S	G	V	P	C	Y	F	I	H	G	N	R	D	.	.	.	.	.	.	.	.	.	.	.	.	F	L	L	G	K	R	F	A	R	E	S	G	M	T	L	L	P	E	E	K	V	L	E	L	Y	G	R	R	V	L	I	M	H	G	D	T	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	K	T	I	S	P	H	I	Q	T	V	L	I	P	S	T	K	D	A	I	S	N	H	A	A	Y	P	Q	A	S	L	I	R	K	A	L	Q	L	P	K	R	N	F	K	C	M	A	N	P	S	S	F	Q	I	N	E	I	Y	F	G	C	S	N	V	D	T	F
Template Known Secondary structure				T	T	S		T	T	S								T	T	B	T	T		S			S	B	S	B									T			T	T	T						B	S						T	T								S
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions