Job Description P43341 Confidence 99.90% Date Thu Jan 5 12:02:20 GMT 2012 Rank 7 Aligned Residues 192 % Identity 17% Template c3av0A_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11-rad50 bound to atp s Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.								.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.											.
Query SS confidence																		.	.	.	.	.	.	.											.
Query Sequence		M	A	T	L	F	I	A	D	L	H	L	C	V	E	E	P	.	.	.	.	.	.	.	A	I	T	A	G	F	L	R	F	L	.	A	G	E	A	R	K	A	D	A	L	Y	I	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A	A	A	I	K	A	V	S	D	S	G	V	P
Query Conservation																		.	.	.	.	.	.	.											.
Alig confidence																		.	.	.	.	.	.	.											.																								.	.	.
Template Conservation																																																											.	.	.
Template Sequence		M	M	F	V	H	I	A	D	N	H	L	G	Y	R	Q	Y	N	L	D	D	R	E	K	D	I	Y	D	S	F	K	L	C	I	K	K	I	L	E	I	K	P	D	V	V	L	H	S	G	D	L	F	N	D	L	R	P	P	.	.	.	V	K	A	L	R	I	A	M	Q	A	F	K	K	L	H	E	N	N	I	K
Template Known Secondary structure												B	T			G	G	G																					T	T			S						S		S	B	S	S	S	S			.	.	.																	T	T
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		C	Y	F	I	H	G	N	R	D	F	L	L	G	K	R	F	A	R	E	.	.	.	.	.	S	G	M	T	L	L	P	E	E	K	V	L	E	L	Y	G	R	R	V	L	I	M	H	G	D	T	L	C	T	D	D	A	G	Y	Q	A	F	R	A	K	V	H	K	P	W	L	Q	T	L	F	L	A	L	P	L	F
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	I	V	A	G	N	H	E	M	P	R	R	L	G	E	E	S	P	L	A	L	L	K	D	Y	V	K	I	L	D	G	K	D	V	I	N	V	N	G	E	E	I	F	I	C	G	T	Y	Y	H	K	K	S	K	R	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	K	L	K	N	F	E	S	E	A
Template Known Secondary structure								G	G	G	S		S	S	T	T	S			G	G	G	G	G	T	T	T					S								T	T													S	T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	K	R	I	A	A	R	M	R	A	N	S	K	E	A	N	S	S	K	S	L	A	I	M	D	V	N	Q	N	A	V	V	S	A	M	E	K	H	Q	V	Q	W	L	I	H	G	H	T	H	R	P	A	V	H	E	L	I	A	N	Q	Q	P	A	F	R	V	V	L	G	A
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		K	N	Y	K	K	K	I	L	M	L	H	Q	G	I	N	P	Y	I	P	L	D	Y	E	L	E	H	F	.	.	.	.	.	.	.	.	.	D	L	P	K	F	S	Y	Y	A	L	G	H	I	H	K	R	I	L	E	R	F	N	D	G	.	.	.	.	I	L	A	Y	S	G	S
Template Known Secondary structure			T		S	S										T	T	T	S	S	S	S		S	S		G	G	.	.	.	.	.	.	.	.	.	G	S				S						S			S							S	S	S	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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