Job Description P43341 Confidence 99.92% Date Thu Jan 5 12:02:20 GMT 2012 Rank 2 Aligned Residues 231 % Identity 16% Template c2xmoB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lmo2642 protein; PDBTitle: the crystal structure of lmo2642 Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.																					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		A	T	L	F	I	A	D	L	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	E	E	P	A	I	T	A	G	F	L	R	F	L	A	G	E	A	R	.	K	A	D	A	L	Y	I	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		S	M	V	V	T	T	D	V	H	Y	F	A	P	S	L	T	D	N	G	K	A	F	E	K	Y	V	A	A	G	D	G	K	Q	L	A	Y	S	D	E	I	T	D	A	F	L	A	D	V	E	S	K	K	T	D	V	L	I	I	S	G	D	L	T	N	N	G	.	.	.	.	.	E	K	T	S	H	E	E	L	A
Template Known Secondary structure											B			G	G	G	B												T	S	T	T			G	G	G																T		S						S			B	S	S		.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																													.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	K	A	V	S	D	S	G	V	P	C	Y	F	I	H	G	N	R	D	F	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	R	F	A	R	E	S	G	M	T	L	L	P	E	E	K	V	L	E	L	Y	G	R	R	V	L	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	L	T	Q	V	E	K	N	G	T	Q	V	F	V	V	P	G	N	H	D	I	N	N	P	W	A	R	K	F	E	K	D	K	Q	L	P	T	D	T	I	S	P	T	D	F	S	K	I	Y	S	D	F	G	Y	E	D	A	I	S	S	D	E	F	S	L	S	Y	L	A	A	P	S	S	K	V	W	L	L	M
Template Known Secondary structure										T	T									T	T	T	S	S		T	T						T	T																	T						T	T		S				S	S	S	S						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure													.																													.
Query SS confidence													.																													.
Query Sequence		M	H	G	D	T	L	C	T	D	D	A	.	G	Y	Q	A	F	R	A	K	V	H	K	P	W	L	Q	T	L	F	L	A	L	P	L	F	V	R	K	R	.	I	A	A	R	M	R	A	N	S	K	E	A	N	S	S	K	S	L	A	I	M	D	V	N	Q	N	A	V	V	S	A	M	E	K	H	Q	V	Q	W
Query Conservation													.																													.
Alig confidence													.																													.
Template Conservation
Template Sequence		L	D	T	A	I	Y	K	T	N	M	Q	Q	G	N	P	T	T	E	G	G	L	T	A	G	T	L	D	W	I	K	E	S	S	A	L	A	K	K	N	G	A	K	L	I	P	V	L	H	H	N	L	T	D	H	N	D	V	Q	K	G	Y	T	I	N	Y	N	Q	Q	V	I	D	A	L	T	E	G	A	M	D	F
Template Known Secondary structure					B			T	T					T	S					B																				T	T								S	S	B	S	S			S				T	T	S	B		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																									.						.	.	.
Query SS confidence																									.						.	.	.
Query Sequence		L	I	H	G	H	T	H	R	P	A	V	H	E	L	I	A	N	Q	Q	P	A	F	R	.	V	V	L	G	A	.	.	.	W	H	T	E	G	S	M	V	K	V	T	A	D	D	V	E	L	I	H
Query Conservation																									.						.	.	.
Alig confidence																									.						.	.	.
Template Conservation
Template Sequence		S	L	S	G	H	I	H	T	Q	N	I	R	S	A	K	S	T	D	G	K	E	I	T	D	I	V	T	N	A	L	S	V	F	P	H	K	Y	G	N	I	T	Y	S	A	K	N	K	N	F	T	Y
Template Known Secondary structure						S	S		S									T	T	S											T	T	S	T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions