Job Description P43341 Confidence 99.81% Date Thu Jan 5 12:02:20 GMT 2012 Rank 18 Aligned Residues 156 % Identity 18% Template c1s3mA_ PDB info PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	T	L	F	I	A	D	L	H	L	C	V	E	E	P	A	I	T	A	G	F	L	R	F	L	A	G	E	A	R	K	A	D	A	L	Y	I	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A	A	A	I	K	A	V	S	D	S	G	V	P	C	Y	F	I	H	G	N	R
Query Conservation
Alig confidence												.	.	.																.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.																.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	G	I	M	S	D	T	H	.	.	.	D	H	L	P	N	I	R	K	A	I	E	I	F	N	D	.	.	E	N	V	E	T	V	I	H	C	G	D	F	V	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	I	K	E	F	E	N	L	N	A	N	I	I	A	T	Y	G	N	N
Template Known Secondary structure											T	.	.	.	T														T	.	.	S			S						S				S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G			S								T	T
Template Predicted Secondary structure												.	.	.																.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		81	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		D	F	L	L	G	K	R	F	A	.	.	.	R	E	S	G	M	T	L	L	P	E	E	K	V	L	E	L	Y	G	R	R	V	L	I	M	H	G	D	T	L	C	T	D	D	A	G	Y	Q	A	F	R	A	K	V	H	K	P	W	L	Q	T	L	F	L	A	L	P	L	F	V	R	K	R	I	A	A	R	M	R
Query Conservation											.	.	.
Alig confidence											.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	E	R	C	K	L	K	E	W	L	K	D	I	N	E	E	N	I	I	D	D	F	I	S	V	E	I	D	D	L	K	F	F	I	T	H	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T					S							T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		A	N	S	K	E	A	N	S	S	K	S	L	A	I	M	D	V	N	Q	N	A	V	V	S	A	M	E	K	H	Q	V	Q	W	L	I	H	G	H	T	H	R	P	A	V	H	E	L	I	A	N	Q	Q	P	A	F	R	V	V	L	G	A	W	H	T	.	.	.	.	E	G	S	M	V	K	V	T	A	D	D	V
Query Conservation																																																																		.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.														.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	S	V	L	E	M	A	I	K	S	G	L	Y	D	V	V	I	Y	G	H	T	H	E	R	V	F	E	E	V	.	.	.	.	D	D	V	L	V	I	N	P	G	E	C	C	G	Y	L	T	G	I	P	T	I	G	I	L	D	T	E	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S						S	S									.	.	.	.	T	T									S	S		T	T	T	S									T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
																			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		234	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	R	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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