Return to main results Retrieve Phyre Job Id

Job DescriptionP76616
Confidence90.95%DateThu Jan 5 12:25:01 GMT 2012
Rank214Aligned Residues55
% Identity15%Templated1vema2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250.........260.........270..... ....280.........290........
Predicted Secondary structure 
































.....





Query SS confidence 



















































. . . . .






















Query Sequence  NATYQQIRENMSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPE. . . . . DLCTIHNPMGDLQDFIALVKDAK
Query Conservation        
      
   

  
   
                  






 .....

  


 


 



 

 


Alig confidence 

























..................







.....


..........









Template Conservation    
 
    

  

 



 
 


.................. 

 


  

 



.......... 

 
 

  
Template Sequence  VTNWETFENDLRWAKQNGFYAITVDF. . . . . . . . . . . . . . . . . . WWGDMEKNGDQQFDFS. . . . . . . . . . YAQRFAQSVK
Template Known Secondary structure  TS
TT..................T
SSTT



..........
Template Predicted Secondary structure 






..................









..........
Template SS confidence 















































































   25....30.........40.........50 .........60...... ...70......
 
   299300......
Predicted Secondary structure 


Query SS confidence 







Query Sequence  KFGIDIIP
Query Conservation 
 





Alig confidence 







Template Conservation    




 
Template Sequence  NAGMKMIP
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 







   77..80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions