Job Description P76616 Confidence 99.95% Date Thu Jan 5 12:25:01 GMT 2012 Rank 104 Aligned Residues 207 % Identity 14% Template d1iv8a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	Q	Q	I	R	E	N	M	S	E	F	A	R	C	H	Y	G	Y	I	Q	I	P	P	V	T	T	F	R	A	D	G	P	E	T	P	E	E	E	K	G	Y	W	F	H	A	Y	Q	P	E	D	L	C	T	I	H	N	P	M	G	D	L	Q	D	F	I	A	L	V	K	D	A	K	K	F	G	I	D	I	I
Query Conservation
Alig confidence														.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	G	D	V	I	D	N	L	W	Y	F	.	D	L	G	V	S	H	L	Y	L	S	P	V	L	M	A	S	P	G	.	.	.	.	.	.	.	.	.	.	.	S	N	H	G	Y	D	V	I	D	H	S	R	I	N	D	E	L	G	G	E	K	E	Y	R	R	L	I	E	T	A	H	T	I	G	L	G	I	I
Template Known Secondary structure									T	T	T	T		.																	T	T	.	.	.	.	.	.	.	.	.	.	.		S	S			S									T	T	T	T															T	T
Template Predicted Secondary structure														.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		306	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		P	D	Y	T	F	N	F	.	.	M	G	I	G	G	S	G	K	N	D	L	D	Y	P	S	A	D	I	R	A	K	I	S	K	D	I	E	G	G	I	P	G	Y	W	Q	G	Q	V	L	I	P	F	I	K	D	P	V	T	K	E	R	K	Q	I	H	P	E	D	I	H	L	T	A	K	D	F	E	A	S	K	D
Query Conservation									.	.
Alig confidence									.	.														.	.											.	.
Template Conservation																								.	.											.	.
Template Sequence		Q	D	I	V	P	N	H	M	A	V	N	S	L	N	W	R	L	M	D	V	L	M	.	.	G	S	Y	Y	T	Y	F	D	F	F	.	.	P	E	D	D	K	I	R	L	P	I	L	G	E	D	L	D	T	V	I	S	K	G	L	L	K	I	V	K	D	G	D	E	Y	F	L	E	Y	F	K	W	K	L	P	L
Template Known Secondary structure							S						T	T										.	.				G	G	G	B		B		.	.	T	T		S	S							S	S								T	T								S	S							T	T
Template Predicted Secondary structure																								.	.											.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.																400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query Sequence		N	I	S	K	D	E	W	E	N	L	H	A	L	K	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	N	G	M	P	K	T	T	P	K	S	D	Q	V	I	M	L	Q	N	Q	Y	V	R	E	M	R	K	Y	G	V	R	G	L	R	Y	D	A	A	K	H	S	.	.	K	H	E	Q	I
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.								.	.	.	.																		.	.
Template Conservation																																														.								.	.	.	.
Template Sequence		T	E	V	G	N	D	I	Y	D	T	L	Q	K	Q	N	Y	T	L	M	S	W	K	N	P	P	S	Y	R	R	F	F	D	V	N	T	L	I	G	V	N	V	E	D	H	.	V	F	Q	E	S	H	S	.	.	.	.	I	L	D	L	D	V	D	G	Y	R	I	D	H	I	D	G	L	Y	D	P	E	K	Y	I
Template Known Secondary structure		S				S	S						T	T	S	S						T	T	S			S	B				T	T							B						.						T		.	.	.	.		T	T	S			S					T	T	G	G	G		S
Template Predicted Secondary structure																																														.								.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		447	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	S	I	T	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	L	R	S	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions