Return to main results Retrieve Phyre Job Id

Job DescriptionP76616
Confidence96.93%DateThu Jan 5 12:25:01 GMT 2012
Rank146Aligned Residues89
% Identity16%Templated1bf2a2
SCOP infoGlycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   649650.........660.........670.........680.........690.........700.........710.........720........
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  TKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTLNI
Query Conservation     



 


        
 





        
  
 
  
 
 

 
            
   


 

 

 


Alig confidence 








..











































..






















Template Conservation    
 

  
.. 
     
  
 
 


      
 

    
  
    


  ..   
     
         
  
Template Sequence  SNYAIAYAI. . NGPSLGDSNSIYVAYNGWSSSVTFTLPAPPSGTQWYRVTDTCDW. . NDGASTFVAPGSETLIGGAGTTY
Template Known Secondary structure  T

..
GGGGT
SS

SSS




SSSS

SGG..G
STTSB

TT

STT
Template Predicted Secondary structure 


..
























..




















Template SS confidence 















































































   662.......670 .........680.........690.........700.........710.... .....720.........730.......
 
   729730.........740.
Predicted Secondary structure 




Query SS confidence 












Query Sequence  NIPGRSALLLGKT
Query Conservation 



 




   
Alig confidence 












Template Conservation   
  

 



 
Template Sequence  GQCGQSLLLLISK
Template Known Secondary structure 
SS
Template Predicted Secondary structure 



Template SS confidence 












   738.740.........750
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions