Job Description P76616 Confidence 100.00% Date Thu Jan 5 12:25:01 GMT 2012 Rank 86 Aligned Residues 334 % Identity 15% Template d1avaa2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		217	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																																																									.
Query SS confidence												.	.	.	.	.	.	.	.																																																									.
Query Sequence		E	A	I	L	H	A	F	N	A	T	.	.	.	.	.	.	.	.	Y	Q	Q	I	R	E	N	M	S	E	F	A	R	C	H	Y	G	Y	I	Q	I	P	P	V	T	T	F	R	A	D	G	P	E	T	P	E	E	E	K	G	Y	W	F	H	A	Y	Q	P	E	D	L	C	T	I	H	N	.	P	M	G	D	L
Query Conservation												.	.	.	.	.	.	.	.																																																									.
Alig confidence												.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	L	F	Q	G	F	N	W	E	S	W	K	H	N	G	G	W	Y	N	F	L	M	G	K	V	D	D	I	A	A	A	G	I	T	H	V	W	L	P	P	A	S	Q	S	V	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	Y	M	P	G	R	L	Y	D	L	D	A	S	K	Y	G	N	K
Template Known Secondary structure										T	T	G	G	G		T	T								T	T								T										S		B	S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	S	B			T	T			T	T		T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.														.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	F	I	A	L	V	K	D	A	K	K	F	G	I	D	I	I	P	D	Y	T	F	N	F	M	G	I	G	G	S	G	K	N	D	L	D	Y	P	S	A	D	I	R	A	K	I	S	K	D	I	E	G	G	I	P	G	Y	W	Q	G	Q	V	L	I	P	F	I	K	D	P	V	T	K	E	R	K	Q	I	H
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	L	K	S	L	I	G	A	L	H	G	K	G	V	K	A	I	A	D	I	V	I	N	H	R	T	A	E	H	K	D	G	R	G	I	Y	C	I	F	E	G	G	T	P	D	A	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T										S	B				S				T	T	S								S	S	S	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		P	E	D	I	H	L	T	A	K	D	F	E	A	S	K	D	N	I	S	K	D	E	W	E	N	L	H	A	L	K	E	K	R	L	N	G	M	P	K	T	T	P	K	S	D	Q	V	I	M	L	Q	N	Q	Y	V	R	E	M	R	.	K	Y	G	V	R	G	L	R	Y	D	A	A	K	H	S	K	H	E	Q	I
Query Conservation																																																													.
Alig confidence		.	.	.	.	.	.	.	.																																																				.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	W	G	P	H	M	I	C	R	D	D	R	P	Y	A	D	G	T	G	N	P	D	T	G	A	D	F	G	A	A	P	D	I	D	H	L	N	L	R	V	Q	K	E	L	V	E	W	L	N	W	L	K	A	D	I	G	F	D	G	W	R	F	D	F	A	K	G	Y	S	A	D	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.			G	G	G	B		T	T		T	T	T			S		S				S	S				T	T	S		B	B		T	T	S																	T	T								T	T	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	S	I	T	P	P	L	K	N	Y	N	E	R	L	H	N	T	N	L	F	N	P	K	Y	H	K	K	A	V	M	N	Y	M	E	Y	L	V	T	C	Q	L	D	E	Q	Q	M	S	S	L	L	Y	E	R	D	D	L	S	A	I	D	F	S	L	L	M	K	T	I	K	A	F	S	F	G	G	D	L	Q	T
Query Conservation
Alig confidence																																					.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		K	I	Y	I	D	R	S	E	P	S	F	A	V	A	E	I	W	T	S	L	A	Y	G	G	D	G	K	P	N	L	N	Q	D	Q	H	.	.	.	.	.	R	Q	E	L	V	N	W	V	D	K	V	G	G	K	G	P	A	T	T	F	D	F	T	T	K	G	I	L	N	V	A	V	E	G	E	L	W	R	L	R
Template Known Secondary structure											S												B		T	T	S	S	B		S						.	.	.	.	.													T	T	S	S																T	T	T		G	G	G	G	S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	K	P	G	S	T	I	S	S	I	P	S	E	R	R	I	L	I	N	I	N	H	D	F	P	N	N	G	N	L	F	N	D	F	L	F	N	H	Q	Q	D	E	Q	L	A	M	A	Y	I	A	A	L	P	F	S	R	P	L	V	Y	W	D	G	Q	V	L	K	S	T	T	E	I	K	N	Y	D	G	S
Query Conservation
Alig confidence																																				.	.	.	.																		.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.																		.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	D	G	K	A	P	G	M	I	G	W	W	P	A	K	A	V	T	F	V	D	N	H	D	T	G	S	T	Q	H	M	W	P	.	.	.	.	F	P	S	D	R	V	M	Q	G	Y	A	Y	I	L	T	H	P	.	G	T	P	C	I	F	Y	D	H	F	F	D	W	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S	S		S	S	G	G	G	T		G	G	G					S			T	T	T	S	T	T	T		S	S		.	.	.	.			G	G	G											S	S	.	S											T	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.																		.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	V	G	G	E	A	W	L	N	K	G	C	S	T	Y	Q	Q	L	Y	N	E	F	H	A	L	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	G	L	K	E	E	I	D	R	L	V	S	V	R	T	R	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S															T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions