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Job DescriptionP76616
Confidence100.00%DateThu Jan 5 12:25:01 GMT 2012
Rank62Aligned Residues567
% Identity15%Templatec3zt5D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative glucanohydrolase pep1a; PDBTitle: glge isoform 1 from streptomyces coelicolor with maltose2 bound
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70 .........80.........90.........100.........110.........120.....
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Query Sequence  SCGVYPQGLKDREIISTFHAEKVI. NDLLKNDYKISLSPDTTYRELNKAAQRSITAPDRIGERKTWVYQRDTMIERGDNS
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Template Sequence  QRGRRPAKAVT. GESFEVSATVFREGHDAVGANVVLRDPRGRPG. . . PWTPMRELAPGT. . . . DRWGAT. . . . . VTAGET
Template Known Secondary structure  GGGTB
T.T


SSS


TT

B
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B
SSTTS....
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SS
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   31........40. ........50.........60.........70... ......80..... ....90. ......
 
   126...130.........140.........150.........160.........170.........180.........190...
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Query Sequence  GVYQYGRAEHFTHIISDKPSPKDKYVAYAINIPDYELAADVYNINVTSPSGQQETFKILINLEHLRQT. . . . . . . . . . . .
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Template Sequence  GTWSYTVEAWGDPVTTWRHHARIKIPAGLDTDLVLEEGARLYERAAADVPGREDRRELLAAVDALRDESRPAASRLAAAL
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TSS



TTS
TTS
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   194.....200.........210.........220... ......230.........240.........250..
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Query Sequence  . . . . . . . . . . . LERKSLTAVQKSQCEIITPKKPGEAILHAF. . . . . . . . . . NATYQQIRENMSEFARCHYGYIQIPPVTT
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Template Sequence  TPQVDAVLARHPLRDLVTSSDPLPLLVERERALYGAWYEFFPRSEGTPHTPHGTFRTAARRLPAIAAMGFDVVYLPPIHP
Template Known Secondary structure  SS









GGGS

SS

S

GGGTT




S
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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   253.... ..260.........270.........280.........290.........300.........310.........320....
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Query Sequence  FRADG. . . . . . . . PETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLD
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Template Sequence  IGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLEIALDFALQCSP. DHPWVHK. .
Template Known Secondary structure  B

TT

BGGGBSS

TT



TTSB
BTTB
TTS

GGG

TT



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   258.260.........270.........280.........290.........300.........310.........320....... ..330....
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  YPSADIRAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HPEWFHHRPDGTIAHAENPPKKYQDIY. . . . . . . . . P
Template Known Secondary structure  ...........................................
GGGS


TTS



TTTT
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   335....340.........350.........360. .
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  PKTTPKSDQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYHKKAVMNYMEYLV
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Template Sequence  IAFDADPDGLATETVRILRHWMDHGVRIFRVDNPHTKPVAFWERVIADINGTDP. . . . . . . . . . . . . . . . DVIFLAEAFT
Template Known Secondary structure 


SS
TTT

S
GGGS

T................T



S
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   363......370.........380.........390.........400.........410...... ...420......
 
   485....490.........500.........510.........520.........530.........540.........550.........560....
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Query Sequence  TCQLDEQQMSSLLYERDDLSAIDFSLLMKTIKAFSFGGDLQTLASKPGSTISSIPSERRILININHDFPNNGNLFNDFLF
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Template Sequence  . . . . . RPAMMATLAQIGFQQSYTYFTWRNTKQELT. . . . . . . . EYLTELSGEAASYMRPNFFANTPDILHAYLQHG. . . .
Template Known Secondary structure  .....
T
S
SGGG

S........TGGGGT

S
BTTB

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   427..430.........440.........450...... ...460.........470.........480.........
 
   565....570.........580.........590.........600.........610.... .....620.........630....
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Query Sequence  NHQQDEQLAMAYIAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAW. . . . . . . . . . LNKGCSTYQQLYNEFHALYI
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Template Sequence  . GRPAFEVRAVLAATLS. PTWGIYSGYELCENTPLREGSEEYLDSEKYQLKPRDWTRAAREGTTIAPLVTRLNTIRRENP
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.STTTTTT


BSSTT

SBTT
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G
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   490.........500..... ....510.........520.........530.........540.........550.........560.......
 
   635....640.........650.........660.........670..... ....680...... ...690..... ....700.....
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Query Sequence  DKAGIWSAFEGVSATKNVLAFSRGDSVNINHSPHDGLVIIN. . . KGNEEVEGTWP. . . . NKLQPGIYK. . NMGSNSVNII
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Template Sequence  ALRQLRDLHFHPTDKEEVIAYSK. . . . . . RQGSNTVLVVVNLDPRHTQEATVSLDMPQLGLDWHESVPVRDELT. . . . . .
Template Known Secondary structure  GGG
SS


BS
TT......TT

SSS


TGGGT

TT
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   568.570.........580.........590 .........600.........610.........620.........630.....
 
   706...710.........720.........730.... .....
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Query Sequence  INNTRKIIPPGKVFTLRGGTLNINIPGRS. . ALLLG
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Template Sequence  . . . . . . . . . . GETYHW. GRANYVRLEPGRTPAHVCT
Template Known Secondary structure  ..........T.S
TTT
S
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   636...640. ........650.........660
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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