Return to main results Retrieve Phyre Job Id

Job DescriptionP76616
Confidence74.84%DateThu Jan 5 12:25:01 GMT 2012
Rank298Aligned Residues73
% Identity8%Templatec3pfmA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.........260.........270.........280... ......290.......
Predicted Secondary structure 

































........


Query SS confidence 

























































. . . . . . . .













Query Sequence  TYQQIRENMSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDLCTIHNP. . . . . . . . MGDLQDFIALVKDA
Query Conservation      
      
   

  
   
                  






 

  


 ........


 



 

 

Alig confidence 






























...........















........













Template Conservation          
  
   
  



  
      ...........  
     
 



   
            
  
   
Template Sequence  EQAXLEQLTRRLRELGFSLSLQRFGGRFSXI. . . . . . . . . . . GNLARLGLAYLKIDGSYIRDIDQESDKRLFIEAIQRAA
Template Known Secondary structure 
T
TTTGGGG...........GGT
S
GGGGTTTTT
T
Template Predicted Secondary structure 








...........






Template SS confidence 















































































   539540.........550.........560......... 570.........580.........590.........600.......
 
   298.300.........
Predicted Secondary structure 


Query SS confidence 











Query Sequence  KKFGIDIIPDYT
Query Conservation 

 








Alig confidence 











Template Conservation      
 


 

Template Sequence  HSIDLPLIAERV
Template Known Secondary structure  TT




Template Predicted Secondary structure 



Template SS confidence 











   608.610.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions