Return to main results Retrieve Phyre Job Id

Job DescriptionP76616
Confidence71.18%DateThu Jan 5 12:25:01 GMT 2012
Rank325Aligned Residues66
% Identity17%Templatec3kzpA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative diguanylate cyclase/phosphodiesterase; PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from listaria monocytigenes
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240...... ...250.........260.........270.........280.... ..... 290.
Predicted Secondary structure 



......





























.....

....
Query SS confidence 



















. . . . . .





































. . . . .




. . . .

Query Sequence  YQQIRENMSEFARCHYGYIQ. . . . . . IPPVTTFRADGPETPEEEKGYWFHAYQPEDLCTIHNPM. . . . . GDLQD. . . . FI
Query Conservation     
      
   

  
 ......  
                  






 

  


 
.....

 

....

Alig confidence 



















......









.................










.....




....

Template Conservation         
  
   
  



  
        
  
.................    



   
               
Template Sequence  NAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVXSY. . . . . . . . . . . . . . . . . LPYIIEIKFSLIHFKNIPLEDLLLFIK
Template Known Secondary structure  TT

STTSTT

.................GGG
SGGGGTTS
Template Predicted Secondary structure 











.................







Template SS confidence 















































































   127..130.........140.........150.........160.. .......170.........180.........
 
   292.......300.........
Predicted Secondary structure 


Query SS confidence 

















Query Sequence  ALVKDAKKFGIDIIPDYT
Query Conservation   

 



 








Alig confidence 

















Template Conservation   
   
      


 

Template Sequence  AWANFAQKNKLDFVVEGI
Template Known Secondary structure  TT
Template Predicted Secondary structure 



Template SS confidence 

















   190.........200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions