Job Description P76616 Confidence 99.26% Date Thu Jan 5 12:25:01 GMT 2012 Rank 112 Aligned Residues 292 % Identity 14% Template c3hz3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucansucrase; PDBTitle: lactobacillus reuteri n-terminally truncated glucansucrase2 gtf180(d1025n)-sucrose complex Resolution 2.22 Å

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		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.											.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	T	P	K	S	D	Q	V	I	M	L	Q	N	Q	Y	V	R	E	M	R	.	.	.	.	.	.	.	.	.	.	K	Y	G	V	R	G	L	R	Y	D	A	A	K	H	S	K	H	E	Q	I	E	R	S	I	T	P	P	L	K	N	Y	N	E	R	L	H	N	T	N	L	F	N	P	K	Y	H	K	K	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	D	N	S	N	P	V	V	Q	A	E	E	L	N	W	L	Y	Y	L	M	N	F	G	T	I	T	G	N	N	P	E	A	N	F	D	G	I	R	V	N	A	V	D	N	V	D	V	D	L	L	S	I	A	R	D	Y	F	N	A	A	Y	N	M	.	.	.	.	.	.	.	.	.	.	E	Q	S	D	A	S
Template Known Secondary structure					T	T	S																T							S		T	T	S								T	T	G	G	G	S		T																T	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.											.	1050	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.					.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.					.	.
Predicted Secondary structure																																																		.	.	.	.																							.	.	.	.
Query SS confidence																																																		.	.	.	.																							.	.	.	.
Query Sequence		V	M	N	Y	M	E	Y	L	V	T	C	Q	L	D	E	Q	Q	M	S	S	L	L	Y	E	R	D	D	L	S	A	I	D	F	S	L	L	M	K	T	I	K	A	F	S	F	G	G	D	.	.	.	.	L	Q	T	L	A	S	K	P	G	S	T	I	S	S	I	P	S	E	R	R	I	L	.	.	.	.	I	N
Query Conservation																																																		.	.	.	.																							.	.	.	.
Alig confidence																													.	.																				.	.	.	.																							.	.	.	.
Template Conservation																													.	.
Template Sequence		A	N	K	H	I	N	I	L	E	D	W	G	W	D	D	P	A	Y	V	N	K	I	G	N	P	Q	L	.	.	T	M	D	D	R	L	R	N	A	I	M	D	T	L	S	G	A	P	D	K	N	Q	A	L	N	K	L	I	T	Q	S	L	V	N	R	A	N	D	N	T	E	N	A	V	I	P	S	Y	N	F	V
Template Known Secondary structure			T	T	S									T	T								T	T		S	S	B	.	.														T	S	S		T	T	T				T	T					S	S	S	S			S					S	S		S							S
Template Predicted Secondary structure																													.	.
Template SS confidence
		1055	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.			.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.
		548	.	550	.	.																																.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	H	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	N	G	N	L	F	N	D	F	L	F	N	H	Q	Q	D	E	Q	L	A	M	A	Y	I	A	A	L	P	F	S	R	P	L	V	Y	W	D	G	Q	V	L	K	S
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	H	D	S	N	A	Q	D	Q	I	R	Q	A	I	Q	A	A	T	G	K	P	Y	G	E	F	N	L	D	D	E	K	K	G	M	E	A	Y	I	N	D	Q	N	S	T	N	K	K	W	N	L	Y	N	M	P	S	A	Y	T	I	L	L	T	N	K	D	S	V	P	R	V	Y	Y	G	D	L	Y	Q	D	G
Template Known Secondary structure				S	S	T	T	T																T	T																			T	S	S	S		S	S	S		S													S	S							G	G	G	T	B		S	S
Template Predicted Secondary structure
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.		.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
Predicted Secondary structure																																																				.																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.																					.	.	.	.	.	.	.	.	.
Query Sequence		T	T	E	I	K	N	Y	D	G	S	T	R	V	G	G	E	A	W	L	N	K	G	C	S	T	Y	Q	Q	L	Y	N	E	F	H	A	L	Y	I	D	K	A	G	I	W	S	A	F	E	G	V	.	S	A	T	K	N	V	L	A	F	S	R	G	D	S	V	N	I	N	H	S	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.																					.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																					.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	Y	M	E	H	K	T	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	T	I	T	N	L	L	K	T	R	V	K	Y	V	A	G	G	Q	T	M	S	V	D	K	N	G	I	L	T	N	V	R	F	G	K	G	A	M	N	A	T	D	T	G	T	D	E	T	R	T
Template Known Secondary structure		B	S	T	T		S	B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	S								T	T	S									T	T		S	S	T	T					T	T	T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1213	.	.	.	.	.	.	1220	.	.																				.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.
		667	.	.	670	.	.	.	.	.	.	.	.	.					680	.	.	.	.	.	.	.	.	.			690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.											.	.
Query SS confidence															.	.	.	.											.	.
Query Sequence		P	H	D	G	L	V	I	I	N	K	G	N	E	.	.	.	.	E	V	E	G	T	W	P	N	K	L	.	.	Q	P	G	I	Y	K	N	M	G	S	N	S	V	N	I	I	I	N	N	T	R	K	I	I	P	P	G	K	V	F	T	L	R	G	G	T	L	N	I	N
Query Conservation															.	.	.	.											.	.
Alig confidence															.	.	.	.											.	.																											.
Template Conservation																																																									.
Template Sequence		E	G	I	G	V	V	I	S	N	N	T	N	L	K	L	N	D	G	E	S	V	V	L	H	M	G	A	A	H	K	N	Q	K	Y	R	A	V	I	L	T	T	E	D	G	V	K	N	Y	T	N	D	T	D	A	P	.	V	A	Y	T	D	A	N	G	D	L	H	F	T
Template Known Secondary structure												T	T		B			T	T									T	T	S	T	T											S	S	S					S	S	S	T	T			.						T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		1274	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.		.	1330	.	.	.	.	.	.	.	.	.	1340	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions