Return to main results Retrieve Phyre Job Id

Job DescriptionP76616
Confidence80.47%DateThu Jan 5 12:25:01 GMT 2012
Rank263Aligned Residues59
% Identity22%Templatec3gdbA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative uncharacterized protein spr0440; PDBTitle: crystal structure of spr0440 glycoside hydrolase domain,2 endo-d from streptococcus pneumoniae r6
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   294.....300.........310.........320.........330.........340.........350.........360.........370...
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Query Sequence  VKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHL
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Template Sequence  IDAGHRNGVPVYGTLFFNWSNSIADQERFAEALKQDADGSFP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT



T


TTS

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   274.....280.........290.........300.........310.....
 
   374.....380.........390.........400.........410.........420.........430...
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Query Sequence  TAKDFEASKDNISKDEWENLHALKEKRLNGMPKTTPKSDQVIMLQNQYVREMRKYGVRGL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IARKLVDMAKYY. . . GYDGY
Template Known Secondary structure  ...........................................T

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   316...320....... ..330..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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