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Job DescriptionP76616
Confidence100.00%DateThu Jan 5 12:25:01 GMT 2012
Rank58Aligned Residues450
% Identity16%Templatec3czkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sucrose hydrolase; PDBTitle: crystal structure analysis of sucrose hydrolase(suh) e322q-2 sucrose complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173...... 180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  SPSGQQE. . TFKILINLEHLRQTLERKSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMSEFARCHYGYIQIPPV
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Template Sequence  HAGWFGQPHMLGYSAYADRFA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTLQGVAERVPYLQELGVRYLHLLPF
Template Known Secondary structure 
TTGGGSTT


.................................SSTT
S


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   82.......90.........100.. .......110.........120........
 
   251........260.........270.........280.........290.........300.........310.........320.........330
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Query Sequence  TTFRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADI
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Template Sequence  LRARAG. . . . . . . . . . DNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVLNHTADDHAWAQAARAGDARY
Template Known Secondary structure 
SS..........

TTTTS
TTT

TT



STTSTT
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   129130.... .....140.........150.........160.........170.........180.........190........
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  RAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMPKTTPK
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Template Sequence  LDYYHHFADRTVPDRYEATLGQVFPHTAPGNFTWVDDTAQW. . . . . . . . . . . . . . . . . . . . . . . . MWTTFYPYQWDLNWS
Template Known Secondary structure  TTB
SSS


SBTTTB

STTTT........................
SSSTTB
TT
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   199200.........210.........220.........230......... 240.........250....
 
   411........420.........430.........440. ........450.........460.........470.......
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Query Sequence  SDQVIMLQNQYVREMRKYGVRGLRYDAAKHS. . . . . . . . . . . . . KHEQIERSITPPLKNYNERLHNTNLFNPKYHKKAVM
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Template Sequence  NPAVFGDMALAMLRLANLGVEAFRLDSTAYLWKRIGTDCMNQSEAHTLLVALRAVTDIVAPAVVMKAQAIVPMTQLPPYF
Template Known Secondary structure  STT

TTTTSS


TTS
SSS

TT





GGGSGGGG
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   255....260.........270.........280.........290.........300.........310.........320.........330....
 
   478.480.........490.........500.........510.........520.........530.........540.........550.......
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Query Sequence  NYMEYLVTCQLDEQQMSSLLYERDDLSAIDFSLLMKTIKAFSFGGDLQTLASKPGSTISSIPSERRILININHDFPNNGN
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Template Sequence  G. . . . . . . . . . . . . . . SGVDEGHECHLAYHSTLMAAGWSALA. LQRGDILHNVIAHSPPLPRHCAWLSYVRCHDDIGWNV
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GGGTTSS
S
.T
TTS



TT
S

SS
GGG
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   335 ....340.........350.........360. ........370.........380.........390........
 
   558.560...... ...570........
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Query Sequence  LFNDFLFNH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QQDEQLAMAYIA
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Template Sequence  LQHEACGNAAQPPFSLRDVARFYANAVPGSYARGESFQGVHGTNGMAAALAGIQAAQEAGDAAALAVAVDRLVLLYAIAL
Template Known Secondary structure  GT

SSS



T
STT










TTTT
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   399400.........410.........420.........430.........440.........450.........460.........470........
 
   579580.........590.........600........ .610........ .620.........630.........640
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Query Sequence  ALPFSRPLVYWDGQVLKSTTEIKNYDGSTR. . . . . . . VGGEAWLNKG. . . . . . . . . . . CSTYQQLYNEFHALYIDKAGIW
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Template Sequence  AMP. GVPLIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQLAAQRHDAKSLSGTVYRRLRGLIRQRAALGALAADQ
Template Known Secondary structure  SS.TTGGGT



GGGGG
TTTTT
GGGGG




TTS
TTST
GGGSTTS
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   483.. ....490.........500.........510.........520.........530.........540.........550.........560.
 
   641........650.........660.........670.........680.........690.........700.........710.........720
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Query Sequence  SAFEGVSATKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFT
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Template Sequence  ALASIALNDPRVFALTRGDS. . . . . . . . . FIALHNFSDQLLDVELAAIGVDGWTLLRGDGS. . . . . . . . . . . . . . . . . . .
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S
TTTTT.........
SSS

GGGTT







S
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   562.......570.........580. ........590.........600.........610...
 
   721........730.........740.
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Query Sequence  LRGGTLNINIPGRSALLLGKT
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Template Sequence  . . . . . . . IVLPPYGVRWLQRG
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TT


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   625....630........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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