Job Description P76616 Confidence 99.76% Date Thu Jan 5 12:25:01 GMT 2012 Rank 106 Aligned Residues 310 % Identity 11% Template c3aicC_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucosyltransferase-si; PDBTitle: crystal structure of glucansucrase from streptococcus mutans Resolution 3.11 Å

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.											.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		E	W	E	N	L	H	A	L	K	E	K	R	L	N	G	M	P	K	T	T	P	K	S	D	Q	V	I	M	L	Q	N	Q	Y	V	R	E	M	R	.	.	.	.	.	.	.	.	.	.	K	Y	G	V	R	G	L	R	Y	D	A	A	K	H	S	K	H	E	Q	I	E	R	S	I	T	P	P	L	K	N	Y	N
Query Conservation																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Y	T	A	D	R	T	I	G	G	Y	E	F	L	L	A	N	D	V	D	N	S	N	P	V	V	Q	A	E	Q	L	N	W	L	H	F	L	M	N	F	G	N	I	Y	A	N	D	P	D	A	N	F	D	S	I	R	V	D	A	V	D	N	V	D	A	D	L	L	Q	I	A	G	D	Y	L	K	A	A	K	G
Template Known Secondary structure		T			S			S		S			S			S	S					T	T	S															T	T							S		G	G	G								T	T	G	G	G	S		T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.					520	.	.	.	.	.	.	.	.	.					530
Predicted Secondary structure																																																															.	.	.	.											.	.	.	.
Query SS confidence																																																															.	.	.	.											.	.	.	.
Query Sequence		E	R	L	H	N	T	N	L	F	N	P	K	Y	H	K	K	A	V	M	N	Y	M	E	Y	L	V	T	C	Q	L	D	E	Q	Q	M	S	S	L	L	Y	E	R	D	D	L	S	A	I	D	F	S	L	L	M	K	T	I	K	A	F	S	.	.	.	.	F	G	G	D	L	Q	T	L	A	S	.	.	.	.	K
Query Conservation																																																															.	.	.	.											.	.	.	.
Alig confidence										.	.	.	.	.	.	.																.	.	.												.	.																.	.	.	.											.	.	.	.
Template Conservation										.	.	.	.	.	.	.																.	.	.												.	.
Template Sequence		I	H	K	N	D	K	A	A	.	.	.	.	.	.	.	N	D	H	L	S	I	L	E	A	W	S	Y	N	D	T	.	.	.	P	Y	L	H	D	D	G	D	N	M	I	.	.	N	M	D	N	R	L	R	L	S	L	L	Y	S	L	A	K	P	L	N	Q	R	S	G	M	N	P	L	I	T	N	S	L	V	N
Template Known Secondary structure		T	T	T						.	.	.	.	.	.	.		T	T								S	T	T			.	.	.						T	T		S	S	B	.	.		B												T	T	S		G	G	G				S	T					S	S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.																.	.	.												.	.
Template SS confidence
		500	.	.	.	.	.	.	.								.	.	510	.	.	.	.	.	.	.	.	.	520	.	.				.	.	.	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.																.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570																			.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	S	T	I	S	S	I	P	S	E	R	R	I	L	I	N	I	N	H	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	N	G	N	L	F	N	D	F	L	F	N	H	Q	Q	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	A	M	A	Y	I
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	D	D	N	A	E	T	A	A	V	P	S	Y	S	F	I	R	A	H	D	S	E	V	Q	D	L	I	R	D	I	I	K	A	E	I	N	P	N	V	V	G	Y	S	F	T	M	E	E	I	K	K	A	F	E	I	Y	N	K	D	L	L	A	T	E	K	K	Y	T	H	Y	N	T	A	L	S	Y	A	L	L
Template Known Secondary structure			S					S	B		S	S						S			S	S	T	T	T												T		T	T			T	T																					S	S		S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.					.	.	.	650	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		A	A	L	P	F	S	R	P	L	V	Y	W	D	G	Q	V	L	K	S	T	T	E	I	K	N	Y	D	G	S	T	R	V	G	G	E	A	W	L	N	K	G	C	S	T	Y	Q	Q	L	Y	N	E	F	H	A	L	Y	I	D	K	A	G	I	W	S	A	F	E	G	V	.	.	.	.	S	A	T	K	N	V	L
Query Conservation																																																																							.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	N	K	S	S	V	P	R	V	Y	Y	G	D	M	F	T	D	D	G	Q	Y	M	A	H	K	T	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	A	I	E	T	L	L	K	A	R	I	K	Y	V	S	G	G	Q	A	M	R	N	Q	Q	V	G	N	S	E	I	I
Template Known Secondary structure		T	T		S	S	S										B		S	S	B	S	T	T		S	B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	S										T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.																				.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.
		654	.	.	.	.	.	660	.	.	.	.	.											.	.	.	.	670	.	.	.	.	.	.	.	.				.	680	.	.	.	.	.	.	.	.	.			690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.		.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.														.	.	.												.	.																	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.														.	.	.												.	.																	.
Query Sequence		A	F	S	R	G	D	S	V	N	I	N	H	.	.	.	.	.	.	.	.	.	.	S	P	H	D	G	L	V	I	I	N	K	G	N	.	.	.	E	E	V	E	G	T	W	P	N	K	L	.	.	Q	P	G	I	Y	K	N	M	G	S	N	S	V	N	I	I	.	I	N	N	T	R	K	I	I	P	P	G	K
Query Conservation														.	.	.	.	.	.	.	.	.	.														.	.	.												.	.																	.
Alig confidence														.	.	.	.	.	.	.	.	.	.														.	.	.												.	.																	.
Template Conservation
Template Sequence		T	S	V	R	Y	G	K	G	A	L	K	A	T	D	T	G	D	R	I	T	R	T	S	G	V	V	V	I	E	G	N	N	P	S	L	R	L	K	A	S	D	R	V	V	V	N	M	G	A	A	H	K	N	Q	A	Y	R	P	L	L	L	T	T	D	N	G	I	K	A	Y	H	S	D	Q	E	A	A	G	L	V
Template Known Secondary structure								T	T			S	T	T									T											T	T		B			T	T									G	G	G	T	T											S	S	S						S	T	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.
		718	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	T	L	R	G	G	T	L	N	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	T	N	D	R	G	E	L	I	F	T
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		789	790	.	.	.	.	.	.	.	.	.	800

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions