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Job DescriptionP76616
Confidence100.00%DateThu Jan 5 12:25:01 GMT 2012
Rank74Aligned Residues461
% Identity13%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  TSPSGQQETFKILINLEHLRQTLERKSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMSEFARCHYGYIQIPPVT
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Template Sequence  MQKHWWHKATVYQIYPKSFMDTNGDGI. . . . . . . . . . . . . . . . . . . . . . . . . . GDLKGITSKLDYLQKLGVMAIWLSPVY
Template Known Secondary structure 



GGGG


GGGT

SSSSSS..........................

TTT
S


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   1........10.........20....... ..30.........40.........50....
 
   252.......260.........270.........280.........290.........300.........310.........320... ......330
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Query Sequence  TFRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDL. DYPSADI
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Template Conservation       ............  

   
   

   

  


 

   
  

 





 

       
           
Template Sequence  DSPMD. . . . . . . . . . . . DNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEHAWFIEAREHPDSSE
Template Known Secondary structure 


T............TTTSS
S
GGG

TTT


SB

TTS
TTSGG
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   55.... 60.........70.........80.........90.........100.........110.........120..
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  RAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMPKTTPK
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Template Conservation   
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Template Sequence  RDYYIWCDQPNDLESIFGGSAWQY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DDKSDQYYLHFFSKKQPDLNWE
Template Known Secondary structure  GGGB
SS

S
B
TTSSBS..................................TTTT
SS
TTS
BB
TT
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   123......130.........140...... ...150.........160........
 
   411........420.........430.........440.........450.........460.........470.........480.........490
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Query Sequence  SDQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYHKKAVMNYMEYLVTCQLDE
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Template Sequence  NANLRQKIYDMMNFWIDKGIGGFRMDVIDMIGKIPAQHIVSNGPKLHAYLKEMNAASFG. . . QHDLLTVGQTWGATPEIA
Template Known Secondary structure 
TTT

TTGGGTT
BGGGTB
SS
TTTGG...GS


TT

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   169170.........180.........190.........200.........210.........220....... ..230.........240.....
 
   491........500.........510.........520 .........530......... 540.........550.........560..
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Query Sequence  QQMSSLLYERDDLSAIDFSLLMKTIKAFSF. . . . . . GGDLQTLASKPGSTISSIP. . SERRILININHDFPNNGNLFNDF
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Template Conservation          .                                                          

           
Template Sequence  KQYSNPVN. HELSMVFQFEHIGLQHKPEAPKWDYVKELNVPALKTIFNKWQTELELGQGWNSLFWNNHDLPRVLSIWGNT
Template Known Secondary structure 
GGG.
S
S

TTGGGGB
TTS
TTSB

S

S
TTT



S

TTS

S
S
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   246...250... ......260.........270.........280.........290.........300.........310.........320....
 
   563......570.........580.........590.........600..... ....610
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Query Sequence  LFNHQQDEQLAMAYIAALPFSRPLVYWDGQVLKSTTEIKNYDG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STRVG
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Template Conservation                    
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Template Sequence  GKYREKSAKALAILLHLMR. GTPYIYQGEEIGMTNYPFKDLNELDDIESLNYAKEAFTNGKSMETIMDSIRMIGRDNART
Template Known Secondary structure  STTTSS.STTGGGT






SGGG


TTT


GGGG
S
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   325....330.........340... ......350.........360.........370.........380.........390.........400...
 
   611....... .620.........630.........640.........650........
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Query Sequence  GEAWLNKG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CSTYQQLYNEFHALYIDKAGIWSAFEGVSATKNVLAFSRG
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Template Sequence  PMQWDASQNAGFSTADKTWLPVNPNYKDINVQAALKNSNSIFYTYQQLIQLRK. . ENDWLVDADFELLPTADKVFAYLR.
Template Known Secondary structure 




SSGGGGS

SSS
SS


GGGGTS
STTS..
T




TT.
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   404.....410.........420.........430.........440.........450...... ...460.........470.........480
 
   659660.........670.........680.........690.........700.........710.........720.........730........
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Query Sequence  DSVNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALLL
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Template Sequence  . . . . . KVREERYLIVVNVSDQEEVLE. . . . IDVDKQETLIS. . . . . . . . . . . . . . . . . . NTNESAALANHKLQPWDAFCI
Template Known Secondary structure  .....TT
SSS


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..................SS
T
TT
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   481........490.........500. ........510.. .......520.........530...
 
   739
Predicted Secondary structure 
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Query Sequence  G
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  K
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   534
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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