Job Description P76616 Confidence 94.44% Date Thu Jan 5 12:25:01 GMT 2012 Rank 189 Aligned Residues 127 % Identity 13% Template c2x2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:alpha-1,4-glucan lyase isozyme 1; PDBTitle: crystal structure of the gracilariopsis lemaneiformis alpha-2 1,4-glucan lyase with acarbose Resolution 2.60 Å

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290									.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		E	D	L	C	T	I	H	N	P	M	G	D	L	Q	D	F	.	.	.	.	.	.	.	.	I	A	L	V	K	D	A	K	K	F	G	I	D	I	I	P	D	Y	T	F	N	F	M	G	I	G	G	S	G	K	N	D	L	D	Y	P	S	A	D	I	R	A	K	I	S	K	D	I	E	G	G	I	P	G	Y	W
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence						.												.	.	.	.	.	.	.	.																					.
Template Conservation						.																																								.
Template Sequence		R	V	F	T	.	T	K	G	E	F	W	T	A	N	R	V	G	T	G	G	D	P	N	N	R	S	V	F	E	W	A	H	D	K	G	L	V	C	Q	T	N	I	T	C	.	F	L	R	N	D	N	E	G	Q	D	Y	E	V	N	Q	T	L	R	E	R	Q	L	Y	T	K	N	D	S	L	T	G	T	D	F	G
Template Known Secondary structure		B	T	T		.			G	G	G	B	T	T	S	S				S			T	T	S		B							T	T	T									S	.							T	T												T	T		B					B	T	T
Template Predicted Secondary structure						.																																								.
Template SS confidence
		420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.		.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	Q	V	L	I	P	F	I	K	D	P	V	T	K	E	R	K	Q	I	H	P	E	D	I	H	L	T	A	K	D	F	E	A	S	K	D	N	I	S	K	D	E	W	E	N	L	H	A	L	K	E	K	R	L	N	G	M	P	K	T	T	P	K	S	D	Q	V	I	M	L	Q	N	Q	Y	V	R	E	M	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Sequence		M	T	D	D	G	P	S	.	.	.	.	.	.	.	.	.	.	D	A	Y	I	G	H	L	D	Y	G	G	G	V	E	C	D	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	D	W	.	.	G	R	P	D	V	A	E	W	W	G	N	N	Y	K	K	L	F
Template Known Secondary structure				S	S	S		T	.	.	.	.	.	.	.	.	.	.	T	S								S	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		T	.	.	T	S	T	T									T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		498	.	500	.	.	.	.											.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.																							.	.	.	.			.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		427	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	G	V	R	G	L	R	Y	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	G	L	D	F	V	W	Q	D	M
Template Known Secondary structure		T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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