|   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | S | G | Q | Q | E | T | F | K | I | L | I | N | L | E | H | L | R | Q | T | L | E | R | K | S | L | T | A | V | Q | K | S | Q | C | E | I | I | T | P | K | K | P | G | E | A | I | L | H | A | F | N | A | T | Y | Q | Q | I | R | E | N | M | S | E | F | A | R | C | H | Y | G | Y | I | Q | I | P | P | V | T | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   | . | . | . |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|   |
|
Template Sequence |   |
T | P | A | N | P | V | D | E | V | I | Y | E | A | H | V | R | D | F | S | I | D | A | N | S | G | . |
. |
. |
M | K | N | K | G | K | Y | L | A | F | T | E | H | G | T | K | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | H | V | K | T | G | I | D | S | L | K | E | L | G | I | T | T | V | Q | L | Q | P | V | E | E |
Template Known Secondary structure |   |
|
| S | S | G | G | G |
|
|  |  |  |  |
|  |  |  |  |  |
| S | T | T | S |
| . | . | . |
| S | S | T | T | S | G | G | G | G | G |
|
| S |
| B |
| . | . | . | . | . | . | . | . | . | G | G | G |
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  | S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
426 | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | |
|
|
. | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . |
  |
  |   |
253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | A | D | G | P | E | T | P | E | E | E | K | G | Y | W | F | H | A | Y | Q | P | E | D | L | C | T | I | H | N | P | M | G | D | . |
. |
. |
. |
. |
. |
. |
L | Q | D | F | I | A | L | V | K | D | A | K | K | F | G | I | D | I | I | P | D | Y | T | F | N | F | M | G | I | G | G | S | G | K | N | D | L | D | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|   |
|
|
| . | . | . | . | . | . | . |   |
|
|
|
|   |
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . |
|
|
|
|   |   |   |
|   |
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
F | N | S | I | D | E | T | Q | P | D | T | Y | N | . |
. |
. |
. |
W | G | Y | D | P | R | N | Y | N | V | P | E | G | A | Y | A | T | T | P | E | G | T | A | R | I | T | E | L | K | Q | L | I | Q | S | L | H | Q | Q | R | I | G | V | N | M | D | V | V | Y | N | H | T | F | D | V | M | V | S | D | F | D | K | I | V |
Template Known Secondary structure |   |
 | S | S | S |
| T | T | S | T | T | S |
|
| . | . | . | . |
|
|
| S |  |  |  |  |  |  |  |
| G | G | G | S | S |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T |
|
| S |
| S | S | S | S |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
494 | . | . | . | . | . | 500 | . | . | . | . | . | . | |
|
|
|
. | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . |
  |
  |   |
326 | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | S | A | D | I | R | A | K | I | S | K | D | I | E | G | G | I | P | G | Y | W | Q | G | Q | V | L | I | P | F | I | K | D | P | V | T | K | E | R | K | Q | I | H | P | E | D | I | H | L | T | A | K | D | F | E | A | S | K | D | N | I | S | K | D | E | W | E | N | L | H | A | L | K | E | K | R | L | N | G | M | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
Template Sequence |   |
P | Q | Y | Y | Y | R | T | D | S | N | G | N | Y | T | N | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | G | G | N |
Template Known Secondary structure |   |
T | T | T | T | B |
| B |
| T | T | S |
| B |
|
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | T | P | K | S | D | Q | V | I | M | L | Q | N | Q | Y | V | R | E | M | R | . |
K | Y | G | V | R | G | L | R | Y | D | A | A | K | H | S | K | H | E | Q | I | E | R | S | I | T | P | P | L | K | N | Y | N | E | R | L | H | N | T | N | L | F | N | P | K | Y | H | K | K | A | V | M | N | Y | M | E | Y | L | V |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|
| . |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | F | A | T | E | H | P | M | A | Q | K | F | V | L | D | S | V | N | Y | W | V | N | E | Y | H | V | D | G | F | R | F | D | L | M | A | L | L | G | K | D | T | M | A | K | I | S | N | E | L | H | A | I | N | P | G | I | V | L | Y | G | E | P | W | T | G | G | T | S | G | L | S | S | D | Q | L | V | T | K | G | Q |
Template Known Secondary structure |   |
| B |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | T | T | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
| S | S |
| S | S |
|
| S | S |
| T | T | T | S |
|
| T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
591 | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 |
  |
  |   |
485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | |
|
. | . | . | . | . | . | . | . | . | 550 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | C | Q | L | D | E | Q | Q | M | S | S | L | L | Y | E | R | D | D | L | S | A | I | D | F | S | L | L | M | K | T | I | K | A | F | S | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | G | D | L | Q | T | L | A | S | K | P | G | S | T | I | S | S | I | P | S | . |
. |
E | R | R | I | L | I | N | I | N | H | D | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   | . | . |   |   |   |
|
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |
Template Sequence |   |
Q | K | G | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | G | V | F | N | D | N | I | R | N | G | L | D | G | N | V | F | D | K | T | A | Q | G | F | A | T | G | D | P | N | Q | V | D | V | I | K | N | G | V | I | G | S | I | Q | D | F | T | S | A | P | S | E | T | I | N | Y | V | T | S | H | D | N |
Template Known Secondary structure |   |
T | T | T | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
|  |  |  |  |  |  |  |  |
|
| T | T |
| T | T |
|
|
| T | T | T | T |
| S | S |
|  |  |  |  |  |  |  |  | B | T | T | T | T | T | T |
| S | S | G | G | G |  |  |  |
| S |
|
| S | S | S |
Template Predicted Secondary structure |   |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
671 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . |
  |
  |   |
553 | . | . | . | . | . | . | 560 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | |
. | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | |
|
|
|
. | . | . | . | . | 620 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | N | G | N | L | F | N | D | F | L | F | N | H | . |
. |
. |
. |
. |
Q | Q | D | E | Q | L | A | M | A | Y | I | A | A | L | P | F | S | R | P | L | V | Y | W | D | G | Q | V | L | K | . |
S | T | T | E | I | K | N | Y | D | G | S | T | R | V | G | G | E | A | W | . |
. |
. |
. |
L | N | K | G | C | S | T | Y |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |   |
|   |   |
|
|
|   |
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   | . |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
M | T | L | W | D | K | I | L | A | S | N | P | S | D | T | E | A | D | R | I | K | M | D | E | L | A | H | A | V | V | F | T | S | Q | . |
G | V | P | F | M | Q | G | G | E | E | M | L | R | T | K | G | G | N | D | N | S | Y | N | A | G | D | S | V | N | Q | F | D | W | S | R | K | A | Q | F | K | D | V | F | D | Y |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | B | . | S |  |  |  |  |  | T | T | G | G | G | T |
|
|
| T | T |
| S |
|
| T | T |
|
|  |  |  |  | S |
|
| T |  |  |  |  |  | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
738 | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | |
. | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . |
  |
  |   |
623 | . | . | . | . | . | . | 630 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | L | Y | N | E | F | H | A | L | Y | I | . |
. |
. |
. |
. |
D | K | A | G | I | W | S | A | F | E | G | V | S | A | T | K | N | V | L | A | F | S | R | G | D | S | V | N | I | N | H | S | P | H | D | G | L | V | I | I | N | K | G | N | E | E | V | E | G | T | W | P | N | K | L | Q | P | G | I | Y | K | N | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |
| . |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |
|
|   | . | . | . | . |
|
|   |
|   |   |   |   |   |
Template Sequence |   |
F | S | S | M | I | H | L | R | N | Q | H | P | A | F | R | M | T | T | A | D | Q | I | K | Q | N | L | T | F | L | E | S | P | T | N | T | V | A | F | E | L | K | N | Y | A | N | . |
H | D | T | W | K | N | I | I | V | M | Y | N | P | N | K | T | S | Q | T | L | N | . |
. |
. |
. |
L | P | S | G | D | W | T | I | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| G | G | G | G |
|
| S |  |  |  |  |  |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  |
| S | S | G | G | . | G |
| S | S | S |
|  |  |  |  |  |  |
| S | S | S |
|  |  |  |  | . | . | . | . |
|
| S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
817 | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | |
. | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | |
|
|
|
. | . | . | . | . | . | . | 890 | . |
  |
  |   |
698 | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | N | S | V | N | I | I | I | N | N | T | R | K | I | I | P | P | G | K | V | F | T | L | R | G | G | T | L | N | I | N | I | P | G | R | S | A | L | L | L | G | K |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
| . | . |   |
|
|
|
|
|   |
|   |   |
|
|   |   |
Template Sequence |   |
G | L | G | D | Q | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | E | K | S | L | G | H | V | M | G | . |
. |
N | V | Q | V | P | A | I | S | T | L | I | L | K | Q |
Template Known Secondary structure |   |
 |  | T | T |  |  | . | . | . | . | . | . | . | . | . | . | . | S | S | S |
| S |
|  |  |
| S | . | . |  |  |  |  |
| S | S |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
892 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 900 | . | . | . | . | . | . | . | |
|
. | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . |
  |