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Job DescriptionP76616
Confidence100.00%DateThu Jan 5 12:25:01 GMT 2012
Rank44Aligned Residues460
% Identity15%Templatec2wanA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: pullulanase from bacillus acidopullulyticus
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  SPSGQQETFKILINLEHLRQTLERKSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMSEFARCHYGYIQIPPVTT
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Template Sequence  TPANPVDEVIYEAHVRDFSIDANSG. . . MKNKGKYLAFTEHGTKG. . . . . . . . . PDHVKTGIDSLKELGITTVQLQPVEE
Template Known Secondary structure 

SSGGG



STTS
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SSTTSGGGGG

S
B
.........GGG
B
T

S

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   426...430.........440.........450 .........460....... ..470.........480.........490...
 
   253......260.........270.........280...... ...290.........300.........310.........320.....
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Query Sequence  FRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGD. . . . . . . LQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDY
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Template Sequence  FNSIDETQPDTYN. . . . WGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDVVYNHTFDVMVSDFDKIV
Template Known Secondary structure  SSS
TTSTTS

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S
GGGSS
SSTTTT

TT

S
SSSSS
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   494.....500...... ...510.........520.........530.........540.........550.........560.........
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  PSADIRAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMP
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Template Sequence  PQYYYRTDSNGNYTNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGGN
Template Known Secondary structure  TTTTB
B
TTS
B

T............................................................T


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   570.........580..... ....
 
   406...410.........420...... ...430.........440.........450.........460.........470.........480....
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Query Sequence  KTTPKSDQVIMLQNQYVREMR. KYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYHKKAVMNYMEYLV
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Template Sequence  EFATEHPMAQKFVLDSVNYWVNEYHVDGFRFDLMALLGKDTMAKISNELHAINPGIVLYGEPWTGGTSGLSSDQLVTKGQ
Template Known Secondary structure 
B
TTS


TTGGGG

TT

SS
SS

SS
TTTS

TTT
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   591........600.........610.........620.........630.........640.........650.........660.........670
 
   485....490.........500.........510.........520 .........530.........540 .........550..
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Query Sequence  TCQLDEQQMSSLLYERDDLSAIDFSLLMKTIKAFSF. . . . . . . . . . GGDLQTLASKPGSTISSIPS. . ERRILININHDF
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Template Sequence  QKGLG. . . . . . . . . . . . . IGVFNDNIRNGLDGNVFDKTAQGFATGDPNQVDVIKNGVIGSIQDFTSAPSETINYVTSHDN
Template Known Secondary structure  TTTTT.............



TT
TT


TTTT
SS
BTTTTTT
SSGGG
S

SSS
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   671.... ....680.........690.........700.........710.........720.........730.......
 
   553......560...... ...570.........580.........590..... ....600.........610.... .....620..
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Query Sequence  PNNGNLFNDFLFNH. . . . . QQDEQLAMAYIAALPFSRPLVYWDGQVLK. STTEIKNYDGSTRVGGEAW. . . . LNKGCSTY
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Template Sequence  MTLWDKILASNPSDTEADRIKMDELAHAVVFTSQ. GVPFMQGGEEMLRTKGGNDNSYNAGDSVNQFDWSRKAQFKDVFDY
Template Known Secondary structure 


TTS
SB.STTGGGT


TT
S

TT

S

TT
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   738.740.........750.........760.........770. ........780.........790.........800.........810......
 
   623......630.... .....640.........650.........660.........670.........680.........690.......
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Query Sequence  QQLYNEFHALYI. . . . . DKAGIWSAFEGVSATKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNM
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Template Sequence  FSSMIHLRNQHPAFRMTTADQIKQNLTFLESPTNTVAFELKNYAN. HDTWKNIIVMYNPNKTSQTLN. . . . LPSGDWTIV
Template Known Secondary structure 
GGGG

S



TT

SSGG.G
SSS

SSS
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   817..820.........830.........840.........850.........860. ........870.........880.. .......890.
 
   698.700.........710.........720.........730.........740
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Query Sequence  GSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALLLGK
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Template Sequence  GLGDQI. . . . . . . . . . . GEKSLGHVMG. . NVQVPAISTLILKQ
Template Known Secondary structure  TT...........SSS
S

S..
SS
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   892..... ..900....... ..910.........920.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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