 |
Job Description | P76616 | Confidence | 93.01% | Date | Thu Jan 5 12:25:01 GMT 2012 |
Rank | 202 | Aligned Residues | 76 |
% Identity | 17% | Template | c2vrqB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:alpha-l-arabinofuranosidase; |
PDBTitle: structure of an inactive mutant of arabinofuranosidase from2 thermobacillus xylanilyticus in complex with a3 pentasaccharide
|
Resolution | 2.00 Å |
|
 |
  |   |
664 | . | . | . | . | . | 670 | . | . | . | . | . | . | . | |
. | . | 680 | . | . | . | . | . | . | |
|
|
|
. | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | |
|
. | . | . | . | . | 710 | . | . | . | . | . | . | |
. | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  | . | . |  |
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | H | S | P | H | D | G | L | V | I | I | N | K | G | . |
N | E | E | V | E | G | T | W | P | . |
. |
. |
. |
N | K | L | Q | P | G | I | Y | K | N | M | G | S | N | S | V | N | I | . |
. |
I | I | N | N | T | R | K | I | I | P | P | G | . |
K | V | F | T | L | R | G | G | T | L | N | I | N | I | P | G | R | S | A |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|   |   | . |   |   |   |   |   |   |
|   |   | . | . | . | . |
|   |
|   |   |
|   |
|   |
|
|   |
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |
|   |   |   |
| . |
|
|   |
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
Template Sequence |   |
A | A | D | G | K | I | H | I | S | L | C | N | L | D | F | E | T | G | A | S | V | D | I | E | L | R | G | L | N | G | G | V | S | A | T | G | T | T | L | T | S | G | R | I | D | G | H | N | T | F | D | E | P | E | R | V | K | P | A | P | F | R | D | F | K | L | E | G | G | H | L | N | A | S | L | P | P | M | S | V |
Template Known Secondary structure |   |
| T | T | S |
|  |  |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |  | S |
| S | S |
|  |  |  |  |  |  |  |  |  |
| S | S | T | T |
| B |
|
| S | S | S | T | T | S | S |
|
|  |  |  |
|
|  |  |  |  | T | T |  |  |  |  |  |  |
| S | S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
409 | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . |
  |
  |   |
736 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
L | L | L | G |
Query Conservation |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|
|   |
Template Sequence |   |
T | V | L | E |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
489 | 490 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|