Return to main results Retrieve Phyre Job Id

Job DescriptionP76616
Confidence100.00%DateThu Jan 5 12:25:01 GMT 2012
Rank73Aligned Residues456
% Identity15%Templatec2fhfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: crystal structure analysis of klebsiella pneumoniae2 pullulanase complexed with maltotetraose
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190...... ...200.........210.........220.........230.........240.........
Predicted Secondary structure 






.......




















Query SS confidence 



















. . . . . . .




















































Query Sequence  QQETFKILINLEHLRQTLER. . . . . . . KSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMSEFARCHYGYIQIPP
Query Conservation                      .......                      



       
      
   

  
   
Alig confidence 



















.......



......................


























Template Conservation    
 










  
 
     



 
......................  
        
 

 




 
 


Template Sequence  LAKMTIHESHIRDLSAWDQTVPAELRGKYLA. . . . . . . . . . . . . . . . . . . . . . LTAQESNMVQHLKQLSASGVTHIELLP
Template Known Secondary structure  T

TT
TTS
GGGTTSGGG......................GG
TTST

S
Template Predicted Secondary structure 

















......................














Template SS confidence 















































































   421........430.........440.........450. ........460.........470........
 
   250.........260... ......
Predicted Secondary structure 













............................................................





Query SS confidence 













. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .





Query Sequence  VTTFRADGPETPEE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EKGYWF
Query Conservation                ............................................................    

Alig confidence 













............................................................




.
Template Conservation 
 
     
                                                                    

.
Template Sequence  VFDLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNW.
Template Known Secondary structure 
SSS


GGG


TTSB
TSTTGGGTTSS
BSTT
BTTB
TTSSS


.
Template Predicted Secondary structure 














































































.
Template SS confidence 















































































   479480.........490.........500.........510.........520.........530.........540.........550.......
 
   270.........280...... ...290......... 300.........310.........320.........330.........340.
Predicted Secondary structure 









........

































Query SS confidence 
















. . . . . . .












.









































Query Sequence  HAYQPEDLCTIHNPMGD. . . . . . . LQDFIALVKDAKK. FGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKISKDIEGG
Query Conservation 




 

  


 


....... 



 

 



. 








 



                   
       
Alig confidence  .















.......












.









































Template Conservation  .



  
 


  
 
  
   

 


 

 


   

 





 


         
  
   
 

 
     
Template Sequence  . GYDPFHYTVPEGSYATDPEGTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTG
Template Known Secondary structure  .



STTSS

STTTS


TTS

SSS
TT

STTTSB
B
TTT
Template Predicted Secondary structure  .





















































Template SS confidence 















































































   558.560.........570.........580.........590.........600.........610.........620.........630......
 
   342.......350.........360.........370.........380.........390.........400.........410.........420.
Predicted Secondary structure 





































































Query SS confidence 















































































Query Sequence  IPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMPKTTPKSDQVIMLQNQY
Query Conservation                                     
            
 
   
    
 









 
   
   
Alig confidence 




.......................................................



















Template Conservation       .......................................................

  

  
 
 

  



Template Sequence  SVESA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TCCSDSAPEHRMFAKLIADS
Template Known Secondary structure 
B

T.......................................................TSSB
TTS
Template Predicted Secondary structure 




.......................................................









Template SS confidence 















































































   637..640. ........650.........660.
 
   422.... ...430.........440.........450.........460.........470.........480.........490.........500
Predicted Secondary structure  .







































Query SS confidence 




.









































































Query Sequence  VREMR. KYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYHKKAVMNYMEYLVTCQLDEQQMSSLLYER
Query Conservation 
  

.
 












                                
     


                  
Alig confidence 




.
































..........




























..
Template Conservation     

 









    
           
  
 
 ..........  



 

         
 
       
..
Template Sequence  LAVWTTDYKIDGFRFDLMLYHPKAQILSAWERIKALNPD. . . . . . . . . . IYFFGEGWDSNQSDRFEIASQINLKGTGI. .
Template Known Secondary structure 


TTGGGSBTT
TT..........





S
TTTS
B

TTTTTTSS
..
Template Predicted Secondary structure 












..........





















..
Template SS confidence 















































































   662.......670.........680.........690.........700 .........710.........720.........
 
   501........510.........520.........530......
Predicted Secondary structure 













............................................
Query SS confidence 



































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  DDLSAIDFSLLMKTIKAFSFGGDLQTLASKPGSTIS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     

 

     
  
    
 
  
         ............................................
Alig confidence  ...
































............................................
Template Conservation  ...
 


  

 

     
         

  
                    
       
 
         
    
Template Sequence  . . . GTFSDRLRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKR
Template Known Secondary structure  ...

S
TT

TT


GGGTTTTS

SS



TT
BTT

TTS
Template Predicted Secondary structure  ...














































Template SS confidence 















































































   730.........740.........750.........760.........770.........780.........790.........800......
 
   537..540.........550......... 560.........570.........580.........590..... .
Predicted Secondary structure  .............


















......













.
Query SS confidence  . . . . . . . . . . . . .






















. . . . . .



































.
Query Sequence  . . . . . . . . . . . . . SIPSERRILININHDFPNNGNLF. . . . . . NDFLFNHQQDEQLAMAYIAALPFSRPLVYWDGQVLK. S
Query Conservation  .............  
    



 


  
     ......      
 
  


 




 
 
 







   . 
Alig confidence  .............






















......





















.












.
Template Conservation             
    
   



 



 

 
              
 
  


 






.
 
 

 


 



Template Sequence  GSEIDYNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQ. GIAFDQQGSELLRSK
Template Known Secondary structure  GGGSTTS

BSSGGG
S

SSSS
S
TT

TSS.STTGGGT


Template Predicted Secondary structure 
































.







Template SS confidence 















































































   807..810.........820.........830.........840.........850.........860.........870 .........880.....
 
   597..600.........610........ .620.........630.........
Predicted Secondary structure 




















.....................................
Query SS confidence 





















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




















Query Sequence  TTEIKNYDGSTRVGGEAWLNKG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CSTYQQLYNEFHALYIDKAGI
Query Conservation            
      
    .....................................             
       
Alig confidence 





















.....................................












..





Template Conservation   
  


   
  
  

           
                             
    
 

 


..
 



Template Sequence  SFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARVKDAVATPGETELKQMTAFYQELTALRK. . SSPLFT
Template Known Secondary structure  TT
S

TTS


TT
S

S
SSS


GGGTTSS



T..S
GGGG
Template Predicted Secondary structure 























































..
Template SS confidence 















































































   886...890.........900.........910.........920.........930.........940.........950....... ..960...
 
   640...... ...650.........660..... ....670.........680.........690.........700....
Predicted Secondary structure 





...........











....



















Query SS confidence 






. . . . . . . . . . .


















. . . .






































Query Sequence  WSAFEGV. . . . . . . . . . . SATKNVLAFSRGDSVNINH. . . . SPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNI
Query Conservation        
...........     



 


      ....  
 





        
  
 
  
 
 

 
     
Alig confidence 






...........


















....























.........





Template Conservation   
    
               



    
            
 



 
      

 

   .........   
  
Template Sequence  LGDGATVMKRVDFRNTGADQQTGLLVMTIDDGMQAGASLDSRVDGIVVAINAAPESRTLQDFAGT. . . . . . . . . SLQLSA
Template Known Secondary structure 


S
STT

TT
STTTSS
S
TT
SSS

TTSSS.........


Template Predicted Secondary structure 






































.........
Template SS confidence 















































































   964.....970.........980.........990.........1000.........1010.........1020........ .1030....
 
   705....710.........720.........730.........740
Predicted Secondary structure 


















Query SS confidence 



































Query Sequence  IINNTRKIIPPGKVFTLRGGTLNINIPGRSALLLGK
Query Conservation         
   


 

 

 






 




  
Alig confidence 



















..













Template Conservation                     
..





 
  


 
Template Sequence  IQQAAGDRSLASGVQVAADG. . SVTLPAWSVAVLEL
Template Known Secondary structure  TGGGSTTTT

TTS..

TT
Template Predicted Secondary structure 


















..


Template SS confidence 



































   1035....1040.........1050.... .....1060........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions