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Job DescriptionP76616
Confidence97.81%DateThu Jan 5 12:25:01 GMT 2012
Rank127Aligned Residues130
% Identity17%Templatec1zy9A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of alpha-galactosidase (ec 3.2.1.22) (melibiase)2 (tm1192) from thermotoga maritima at 2.34 a resolution
Resolution2.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  TYQQIRENMSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKFGIDII
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Template Sequence  TWEETLKNLKLAKNFPFEVFQIDD. . . . . . . . . . . . . . . . . AYEKDI. . GDWLVTRGDFP. . . SVEEXAKVIAENGFIPG
Template Known Secondary structure 
GGGTT
S
T.................TST..T
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TT
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   198.200.........210.........220. ...... ..230........ .240.........250.....
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  PDYTFNFMGIGGSGKNDLDYPSADIRAKISKDIEGGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNI
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Template Sequence  IWTAPFSVSETSDVFNEHP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DW
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TTTT

G...........................................................GG
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   256...260.........270.... ..
 
   386...390.........400.........410.........420.........430......
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Query Sequence  SKDEWENLHALKEKRLNGMPKTTPKSDQVIMLQNQYVREMRKYGVRGLRYD
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Template Sequence  VVKENGEPKXAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRKXGYRYFKID
Template Known Secondary structure  B
TT
TTB
TT
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   277..280.........290.........300.........310.........320.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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