Return to main results Retrieve Phyre Job Id

Job DescriptionP76616
Confidence47.59%DateThu Jan 5 12:25:01 GMT 2012
Rank492Aligned Residues88
% Identity16%Templatec1nvmG_
PDB info PDB header:lyase/oxidoreductaseChain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   275....280.........290.........300.........310.........320.........330.........340.........350....
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  EDLCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKISKDIEGGIPGYWQGQVLIPF
Query Conservation   

  


 


 



 

 



 








 



                   
                    
Alig confidence 









































......................................
Template Conservation     
 
             
  

  
  
            ......................................
Template Sequence  ARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TT
GGGGTT
TGGGS
......................................
Template Predicted Secondary structure 











......................................
Template SS confidence 















































































   107..110.........120.........130.........140........
 
   355....360.........370.........380.........390.........400.........410.........420.........430....
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  IKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMPKTTPKSDQVIMLQNQYVREMRKYGVRGLR
Query Conservation                        
            
 
   
    
 









 
   
   
  


 





Alig confidence  .............................................................


















Template Conservation  .............................................................             


 
 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EKLAEQGKLMESYGATCIY
Template Known Secondary structure  .............................................................T
S
Template Predicted Secondary structure  .............................................................



Template SS confidence 















































































   149150.........160.......
 
   435 ....440.........450.........460.
Predicted Secondary structure  .











Query SS confidence 
.

























Query Sequence  Y. DAAKHSKHEQIERSITPPLKNYNERL
Query Conservation 
.





                    
Alig confidence 
.

























Template Conservation 
 

 
   
     

  
        
Template Sequence  MADSGGAMSMNDIRDRMRAFKAVLKPET
Template Known Secondary structure 
TTS


S
TTS
Template Predicted Secondary structure 












Template SS confidence 



























   168.170.........180.........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions