 |
Job Description | P75874 | Confidence | 95.93% | Date | Thu Jan 5 12:15:20 GMT 2012 |
Rank | 188 | Aligned Residues | 112 |
% Identity | 13% | Template | d2g0ta1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Nitrogenase iron protein-like
|
Resolution | 2.67 |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | |
. | . | . | . | . | . | |
|
|
. | . | . | 50 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
| . |
|
|  |  |  |  | . | . | . |
|
|
|
|
|
|
|  |  |
| . | . | . | . | . |
|  |  |  |
|
|
|  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | S | T | H | T | I | A | L | V | G | A | S | D | K | P | D | R | P | S | Y | R | V | M | K | Y | L | L | D | Q | . |
G | . |
Y | H | V | I | P | V | . |
. |
. |
S | P | K | V | A | G | K | T | L | L | . |
. |
. |
. |
. |
G | Q | K | G | Y | G | T | L | A | D | V | P | E | . |
K | V | D | M | V | D | V | F | R |
Query Conservation |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   | . |
| . |   |   |
|   |   |
| . | . | . |   |
|   |   |   |   |   |   |
|   | . | . | . | . | . |
|   |   |   |   |   |
|
|   |
|
|
|   | . |   |
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
Template Sequence |   |
L | Y | Q | P | G | T | P | A | A | I | V | A | W | G | Q | L | G | T | A | H | A | K | T | T | Y | G | L | L | R | H | S | R | L | F | K | P | V | C | V | V | A | E | H | E | G | K | X | A | S | D | F | V | K | P | V | R | Y | D | V | P | V | V | S | S | V | E | K | A | K | E | X | G | A | E | V | L | I | I | G | V |
Template Known Secondary structure |   |
 | S |
| T | T |  |  |  |  |  |  |
| T | T | T | T | T | S | G | G | G |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  | S | S |
| T | T |
| B | G | G | G | T |
|
| . |
|
| S |
|
| B |  |  | S | S |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
79 | |
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | . |
. |
. |
. |
. |
. |
S | E | A | A | W | G | V | A | Q | E | A | I | A | I | G | A | K | T | L | W | M | Q | L | G | V | I | N | E | Q | A | A | V | L | A | R | D | A | G | L | N | V | V |
Query Conservation |   |
| . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
Alig confidence |   |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
S | N | P | G | G | Y | L | E | E | Q | I | A | T | L | V | K | K | A | L | S | L | G | X | D | V | I | S | G | L | H | F | S | Q | Q | T | E | F | L | K | I | A | H | E | N | G | T | R | I | I |
Template Known Secondary structure |   |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|