 |
Job Description | P75874 | Confidence | 76.59% | Date | Thu Jan 5 12:15:20 GMT 2012 |
Rank | 431 | Aligned Residues | 68 |
% Identity | 18% | Template | c6reqB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:protein (methylmalonyl-coa mutase); |
PDBTitle: methylmalonyl-coa mutase, 3-carboxypropyl-coa inhibitor complex
|
Resolution | 2.20 Å |
|
 |
  |   |
70 | . | . | . | . | . | . | . | |
|
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
120 | . | . | . | . | . | . | . | . | . | |
|
|
130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |
|
|
|
|
|  |  |  | . | . | . |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | D | M | V | D | V | F | . |
. |
. |
. |
R | N | S | E | A | A | W | G | V | A | Q | E | A | I | A | I | G | A | K | T | L | W | M | Q | L | G | V | I | N | E | Q | A | A | V | L | A | R | D | A | G | L | N | . |
. |
. |
V | V | M | D | R | C | P | A | I | E | . |
. |
. |
I | P | R | L | G | L | A | K |
Query Conservation |   |
  |
|
|
|
|
|
|   | . | . | . | . |
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   | . | . | . |
|
|
|
|
|
|
|
|
|   | . | . | . |   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
G | A | Q | V | A | D | L | C | S | S | A | K | V | Y | A | Q | Q | G | L | E | V | A | K | A | L | K | A | A | G | A | K | A | L | Y | L | S | G | A | F | K | E | F | G | D | D | A | A | E | A | E | K | L | I | D | G | R | L | F | M | G | M | D | V | V | D | T | L | S | S | T | L | D | I | L | G | V | A | K |
Template Known Secondary structure |   |
T |
| S |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
| G | G | G | G | G | G | G |  |  |  |  |  |  |  |
|
|  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
561 | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|