Job Description P75874 Confidence 80.03% Date Thu Jan 5 12:15:20 GMT 2012 Rank 400 Aligned Residues 92 % Identity 14% Template c3r23B_ PDB info PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		T	I	A	L	V	G	A	S	D	K	P	D	R	.	.	.	.	.	.	.	.	.	P	S	Y	R	V	M	K	Y	L	L	D	Q	G	Y	H	V	I	P	V	S	P	K	V	A	G	K	T	L	L	G	Q	K	G	Y	G	T	L	A	D	V	P	E	K	V	D	M	V	D	V	F	R	N	S	E	A	A	W	G
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.			.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	G	V	I	X	G	.	.	.	.	G	V	S	S	E	K	Q	V	S	I	X	T	G	N	E	X	I	A	N	L	D	K	N	K	Y	E	I	V	P	I	T	L	N	E	K	.	.	.	.	.	.	.	.	.	.	X	D	L	I	E	K	A	K	D	I	D	F	A	L	L	A	L	H	G	K	Y	G	E	D
Template Known Secondary structure									.	.	.	.		S																		S		T	T	T									S	S	G	.	.	.	.	.	.	.	.	.	.	G	G					G	G	G		S								S					S
Template Predicted Secondary structure									.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.					.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
				86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure		.	.																						.	.	.	.	.
Query SS confidence		.	.																						.	.	.	.	.
Query Sequence		.	.	V	A	Q	E	A	I	A	I	G	A	K	T	L	W	M	Q	L	G	V	I	N	.	.	.	.	.	E	Q	A	A	V	L	A	R	D	A	G	L	N	V
Query Conservation		.	.																						.	.	.	.	.
Alig confidence		.	.																						.	.	.	.	.
Template Conservation
Template Sequence		G	T	V	Q	G	T	L	E	S	L	G	I	P	Y	S	G	S	N	X	L	S	S	G	I	C	X	D	K	N	I	S	K	K	I	L	R	Y	E	G	I	E	T
Template Known Secondary structure		S									T	T			B	S	S	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions