Return to main results Retrieve Phyre Job Id

Job DescriptionP75874
Confidence94.67%DateThu Jan 5 12:15:20 GMT 2012
Rank232Aligned Residues114
% Identity13%Templatec3ojlA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50...... ...60.. .......70.....
Predicted Secondary structure 

















...


................





Query SS confidence 









































. . .





. . . . . . . . . . . . . . . .












Query Sequence  TIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLL. . . GQKGYG. . . . . . . . . . . . . . . . TLADVPEKVDMVD
Query Conservation 







      
  
   
   
  
  
 
      
 ...
     ................

 


  




Alig confidence 






....






























...





................












Template Conservation 

 



....
 

   
  

  
  
   
    

  
  
  

 
 

   
        
  
     




Template Sequence  KLTVVGL. . . . GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI
Template Known Secondary structure 

....STTTT

S
TT

SS

TTTTSSS



S
Template Predicted Secondary structure 
....



























Template SS confidence 















































































   2...... .10.........20.........30.........40.........50.........60.........70.......
 
   76... 80.........90.. .......100...... ...110.........120.........130..
Predicted Secondary structure 

.............








....










Query SS confidence 



. . . . . . . . . . . .












.













. . . .

























Query Sequence  VFRN. . . . . . . . . . . . SEAAWGVAQEAIA. IGAKTLWMQLGVIN. . . . EQAAVLARDAGLNVVMDRCPAIEIPR
Query Conservation 
 

............   
   
 
   . 

  
    
   ....      
   

 








  

Alig confidence 



............












.













....

























Template Conservation 
 
 

   
     

  
      
   
  
 


  


 



        
               

Template Sequence  IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE
Template Known Secondary structure 




B
SSTT

B

GGG

TT

S


TTTTTT

BTTTB


Template Predicted Secondary structure 


































Template SS confidence 









































































   78.80.........90.........100.........110.........120.........130.........140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions