Job Description P75874 Confidence 76.84% Date Thu Jan 5 12:15:20 GMT 2012 Rank 429 Aligned Residues 102 % Identity 13% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.										.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.													.						.
Query SS confidence																																						.	.	.	.	.	.	.	.	.													.						.
Query Sequence		I	A	L	V	G	A	S	D	K	P	D	R	P	S	Y	R	V	M	K	Y	L	L	D	Q	G	Y	H	V	I	P	V	S	P	K	V	A	.	.	.	.	.	.	.	.	.	G	K	T	L	L	G	Q	K	G	Y	G	T	.	L	A	D	V	P	.	E	K	V	D	M	V	D	V	F	R	N	S	E	A	A	W
Query Conservation																																						.	.	.	.	.	.	.	.	.													.						.
Alig confidence								.	.	.	.																											.	.	.	.	.	.	.	.	.													.						.
Template Conservation								.	.	.	.
Template Sequence		A	L	L	V	G	Y	.	.	.	.	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A
Template Known Secondary structure								.	.	.	.	S													T	T								S											T	T						S		T	T	S							T	T	G	G	G		S							S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		420	.	.	.	.	.					.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	Q	E	A	I	A	I	G	A	K	T	L	W	M	Q	L	G	V	I	N	E	Q	A	A	V	L	A	R	D	A	G	L	N	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V
Template Known Secondary structure													S	S	S							S	S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions