Job Description P75874 Confidence 95.64% Date Thu Jan 5 12:15:20 GMT 2012 Rank 202 Aligned Residues 106 % Identity 10% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.														.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	T	I	A	L	V	G	A	S	D	K	P	D	R	P	S	Y	R	V	M	K	Y	L	L	D	.	.	.	.	Q	G	Y	H	V	I	P	V	S	P	K	V	A	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	G	Q	K	G	Y	G	T	L	A	D	V	P	E	K	V	D	M	V	D
Query Conservation																												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.														.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		K	N	R	F	V	I	L	G	F	.	.	.	.	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N	D	F	L	I
Template Known Secondary structure			S								.	.	.	.	S														B				G	G	G						S	S			S								T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																						.
Query SS confidence																									.	.	.	.	.	.	.	.	.																						.
Query Sequence		V	F	R	N	S	E	A	A	W	G	V	A	Q	E	A	I	A	I	G	A	K	T	L	.	.	.	.	.	.	.	.	.	W	M	Q	L	G	V	I	N	E	Q	A	A	V	L	A	R	D	A	G	L	N	.	V	V	M
Query Conservation																									.	.	.	.	.	.	.	.	.																						.
Alig confidence																									.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		D	V	S	I	G	I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	T
Template Known Secondary structure					S	S	S													T						S	S																			T	T	T	T	T			S					S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions