Return to main results Retrieve Phyre Job Id

Job DescriptionP75874
Confidence75.21%DateThu Jan 5 12:15:20 GMT 2012
Rank447Aligned Residues40
% Identity20%Templatec2hkoA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50........
Predicted Secondary structure 





















Query SS confidence 














































Query Sequence  STHTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQ
Query Conservation   









      
  
   
   
  
  
 
      
 
 
Alig confidence 









....




















...








Template Conservation    
 





....




 

  
   
  



...

  
 


Template Sequence  KTGKVIIIGS. . . . GVSGLAAARQLQSFGMDVTLL. . . EARDRVGGR
Template Known Secondary structure 
S


....BTT
...
SSSSSBSS
Template Predicted Secondary structure 




....



...





Template SS confidence 














































   277..280...... ...290.........300....... ..310......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions