Job Description P75874 Confidence 85.17% Date Thu Jan 5 12:15:20 GMT 2012 Rank 352 Aligned Residues 89 % Identity 17% Template c1rm4O_ PDB info PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase a; PDBTitle: crystal structure of recombinant photosynthetic glyceraldehyde-3-2 phosphate dehydrogenase a4 isoform, complexed with nadp Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.																																.	.	.	.	.	.	.	.	60
Predicted Secondary structure																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	A	L	V	G	A	S	D	K	P	D	R	P	S	Y	R	V	M	K	Y	L	L	D	Q	G	.	.	.	Y	H	V	I	P	V	S	P	K	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	T	L	L	G	Q	K	G
Query Conservation																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		K	V	A	I	N	G	F	.	.	.	.	G	R	I	G	R	N	F	L	R	C	W	H	G	R	K	D	S	P	L	D	V	V	V	I	N	D	T	G	G	V	K	Q	A	S	H	L	L	K	Y	D	S	I	L	G	T	F	D	A	D	V	K	T	A	G	D	S	A	I	S	V	D	G	K	V	I	K	V	V	S
Template Known Secondary structure									.	.	.	.	S												T		S	S		S									T	T													T	T	T		S		S	S						T	T	S					T	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.					.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		Y	G	T	L	A	D	V	P	.	.	.	E	K	V	D	M	V	D	V	F	R	N	S	E	A	A	W	G	V	A	Q	E	A	I	A	I	G	A	K	T	L	W	M	Q	L	G	V	I	N	E
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		D	R	N	P	V	N	L	P	W	G	D	M	G	I	D	L	V	I	E	G	T	G	V	F	V	D	R	D	G	A	G	K	H	L	Q	A	G	A	K	K	V	L	I	T	A	P	G	K	G	D
Template Known Secondary structure			S		G	G	G	S						T								S	S	S			B										T	T		S					S	S			B	S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions