Phyre 2 alignment of P75874 with c1l7eC

Job Description P75874
Confidence 82.35% Date Thu Jan 5 12:15:20 GMT 2012

Rank 376 Aligned Residues 65

% Identity 14% Template c1l7eC_

PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh

Resolution 1.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.											.	.	.
Query SS confidence																																											.	.	.											.	.	.
Query Sequence	T	S	T	H	T	I	A	L	V	G	A	S	D	K	P	D	R	P	S	Y	R	V	M	K	Y	L	L	D	Q	G	Y	H	V	I	P	V	S	P	K	V	A	G	.	.	.	K	T	L	L	G	Q	K	G	Y	G	.	.	.	T	L	A	D	V	P	E	K	V	D	M	V	D	V	F	R	N
Query Conservation																																											.	.	.											.	.	.
Alig confidence												.	.	.	.																												.	.	.											.	.	.
Template Conservation												.	.	.	.
Template Sequence	V	P	P	A	R	V	L	V	F	G	V	.	.	.	.	G	V	A	G	L	Q	A	I	A	T	A	K	R	L	G	A	V	V	M	A	T	D	V	R	A	A	T	K	E	Q	V	E	S	L	G	G	K	F	I	K	Q	A	E	A	V	L	K	E	L	V	K	T	D	I	A	I	T	T	A	L
Template Known Secondary structure												.	.	.	.	S													T	T								S	S	T	T	S					T	T	T	T															T	T		S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
	970	.	.	.	.	.	.	.	.	.	980					.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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