Return to main results Retrieve Phyre Job Id

Job DescriptionP77333
Confidence34.00%DateThu Jan 5 12:27:53 GMT 2012
Rank352Aligned Residues59
% Identity29%Templated1tw3a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Plant O-methyltransferase, N-terminal domain
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10....... ..20.........30.........40.........50. ........60.........
Predicted Secondary structure  .






.




Query SS confidence 









.

































.

















Query Sequence  DLMAFVVVAE. ERSFTRAAARLSMAQSALSQIVRRIEERLGLRLL. TRTTRSVVPTEAGEHLLS
Query Conservation   
  
  
  . 

 
 

  
 






  
  

  

  

. 
      

  
  
  
Alig confidence 









.


























...



.

















Template Conservation   
 


 
  

 
  


   
     
 



 
  ... 

  
     
 

  
  
  
Template Sequence  TLRLVDHILAGARTVKALAARTDTRPEALLRLIRHLVA. . . IGLLEEDAPGEFVPTEVGELLAD
Template Known Secondary structure  TTTT

BT

...TTSTT
TTGGGGST
Template Predicted Secondary structure 













...








Template SS confidence 































































   36...40.........50.........60.........70... ......80.........90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions