Job Description P77333 Confidence 93.50% Date Thu Jan 5 12:27:53 GMT 2012 Rank 153 Aligned Residues 90 % Identity 12% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.	.	.																																							.	.	.	.	.	.
Query SS confidence																			.	.	.	.																																							.	.	.	.	.	.
Query Sequence		R	E	E	I	A	D	L	M	A	F	V	V	V	A	E	E	R	.	.	.	.	S	F	T	R	A	A	A	R	L	S	M	A	Q	S	A	L	S	Q	I	V	R	R	I	E	E	R	L	G	L	R	L	L	T	R	T	T	R	S	.	.	.	.	.	.	V	V	P	T	E	A	G	E	H	L	L	S	V	L	G
Query Conservation																			.	.	.	.																																							.	.	.	.	.	.
Alig confidence																			.	.	.	.																									.														.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		N	L	T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	.	E	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I	I	Q
Template Known Secondary structure		T															S	T	T			B									T	T															.		T	T	S									T	T	S
Template Predicted Secondary structure																																															.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		73	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		P	M	L	H	D	.	I	D	S	A	M	A	S	L	S	D	L	Q	N	R	P	S
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		K	I	V	Q	S	W	A	D	R	L	G	Q	E	L	K	E	W	E	N	G	G	E
Template Known Secondary structure																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions