Job Description P77333 Confidence 99.79% Date Thu Jan 5 12:27:53 GMT 2012 Rank 17 Aligned Residues 205 % Identity 11% Template c3oxnD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus Resolution 2.70 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		Q	N	R	P	S	G	T	I	R	I	T	T	V	E	H	A	A	K	T	I	L	L	P	A	M	R	T	F	L	K	S	H	P	E	I	D	I	Q	L	T	I	D	Y	G	L	T	D	V	V	.	.	S	E	R	F	D	A	G	V	R	L	G	G	E	M	D	K	D	M	I	A	I	R	I	G	P	D	I	P	M
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		P	Q	Q	C	D	Q	T	F	T	I	A	T	T	D	Y	A	X	Q	T	I	L	P	F	A	L	P	R	I	Y	Q	E	A	P	N	V	S	F	N	F	L	P	L	Q	H	D	R	L	S	D	Q	L	T	Y	E	G	A	D	L	A	I	C	R	P	T	G	P	V	E	P	L	R	S	E	I	L	G	R	V	G	V
Template Known Secondary structure				S																T														T	T										G	G	G							T	S			S							S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	G	S	P	D	Y	F	S	R	R	S	V	P	T	S	V	S	Q	L	I	D	H	Q	A	I	N	L	Y	L	P	T	S	G	T	A	N	R	W	R	L	I	R	G	G	R	E	V	R	V	R	M	E	G	Q	L	L	L	N	T	I	D	L	I	I	D	A	A	I	D	G	H	G	L	A	Y	L	P	Y
Query Conservation
Alig confidence																.															.	.	.	.
Template Conservation																.															.	.	.	.
Template Sequence		L	C	L	L	S	K	Q	H	P	L	A	N	Q	E	.	X	S	L	D	D	Y	L	S	H	P	H	A	X	I	.	.	.	.	A	I	S	D	G	V	K	A	L	I	E	Q	A	L	I	D	K	P	Q	R	K	X	V	L	R	A	Y	H	L	E	A	A	L	A	I	V	D	T	L	P	I	I	I	T	V	P	A
Template Known Secondary structure							T	T	S	G	G	G	S	S		.									S						.	.	.	.	S													T	S	S	S										S										T	T	S
Template Predicted Secondary structure																.															.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	V	E	R	A	I	K	E	K	K	L	I	R	V	L	D	K	F	T	P	D	L	P	G	Y	H	L	Y	Y	P	H	R	R	H	A	G	S	A	F	S	L	F	I	D	R	L	K	Y	K	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	A	Y	L	V	A	E	R	Y	D	L	V	V	K	P	L	P	F	Q	F	T	P	F	D	Y	S	X	I	W	H	A	R	C	E	H	S	P	A	Q	E	W	L	R	S	V	V	R	E	E	C	S
Template Known Secondary structure												T							S	S													G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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