Job Description P77333 Confidence 71.63% Date Thu Jan 5 12:27:53 GMT 2012 Rank 230 Aligned Residues 199 % Identity 10% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.										.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure															.																																																.	.	.	.	.	.	.	.	.
Query SS confidence															.																																																.	.	.	.	.	.	.	.	.
Query Sequence		T	I	R	I	T	T	V	E	H	A	A	K	T	.	I	L	L	P	A	M	R	T	F	L	K	S	H	P	E	I	D	I	Q	L	T	I	D	Y	G	L	T	D	V	V	S	E	R	F	D	A	G	V	R	L	G	G	E	M	D	K	D	.	.	.	.	.	.	.	.	.	M	I	A	I	R	I	G	P	D	I
Query Conservation															.																																																.	.	.	.	.	.	.	.	.
Alig confidence															.															.																																	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	.	Y	K	V	D	V	I	A	A	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y	G	V	L	P	R	K	L	X	Y	N
Template Known Secondary structure															T	G	G	G	G	T										.																			T	T	S	S	S																T	T	S
Template Predicted Secondary structure																														.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		P	M	A	I	V	G	S	P	D	Y	F	S	R	R	S	V	P	T	S	V	S	.	.	.	.	.	.	Q	L	I	D	H	Q	A	I	N	L	Y	L	P	T	S	G	T	A	N	R	W	R	L	I	R	G	G	R	E	V	R	V	R	M	E	G	Q	L	L	L	N	T	I	D	L	I	I	D	A	A	I	D	G
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	V	I	V	G	P	K	A	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q	T	K	I	E	P	N	F	G	G	Y	R	S	V	G	Q	G	X	G	P	T	L	N	X	A	S	E	X
Template Known Secondary structure									T	T		T	T			T	T		S												T	T								S		S														T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		H	G	L	A	Y	L	P	Y	D	Q	V	E	R	A	I	K	E	K	K	L	I	R	V	L	D	K	F	T	P	D	L	P	G	Y	H	L	Y	Y	P	H	.	.	.	.	R	R	H	A	G	S	A	F	S	L	F	I	D	R	L	K
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.
Template Conservation
Template Sequence		Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V	N	P	E	R	Y	P	T	I	N	Y	Q	G	A	K	A	F	S	D	W	L	V
Template Known Secondary structure		T														G	G	G		S									G	G	G											T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions