Job Description P77333 Confidence 78.16% Date Thu Jan 5 12:27:53 GMT 2012 Rank 209 Aligned Residues 198 % Identity 10% Template c3lr1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate- PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens Resolution 1.80 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure															.																																												.	.	.	.	.	.	.	.	.
Query SS confidence															.																																												.	.	.	.	.	.	.	.	.
Query Sequence		T	I	R	I	T	T	V	E	H	A	A	K	T	.	I	L	L	P	A	M	R	T	F	L	K	S	H	P	E	I	D	I	Q	L	T	I	D	Y	G	L	T	D	V	V	S	E	R	F	D	A	G	V	R	L	G	G	E	.	.	.	.	.	.	.	.	.	M	D	K	D	M	I	A	I	R	I	G	P	D	I
Query Conservation															.																																												.	.	.	.	.	.	.	.	.
Alig confidence															.															.																													.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		R	L	K	X	S	T	T	T	S	T	Q	D	S	G	L	L	K	V	L	L	P	P	F	E	K	K	N	N	.	V	K	V	D	V	I	A	V	G	T	G	Q	A	L	K	L	G	E	A	G	D	V	D	V	V	F	V	H	A	R	K	L	E	D	K	F	V	A	D	G	F	G	V	N	R	K	D	V	X	Y	N
Template Known Secondary structure																													T	.																			T	T	S		S																T	T	S
Template Predicted Secondary structure																														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		P	M	A	I	V	G	S	P	D	Y	F	S	R	R	S	V	P	T	S	V	S	Q	.	.	.	.	.	.	L	I	D	H	Q	A	I	N	L	Y	L	P	T	S	G	T	A	N	R	W	R	L	I	R	G	G	R	E	V	R	V	R	M	E	G	Q	L	L	L	N	T	I	D	L	I	I	D	A	A	I	D	G
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	V	I	V	G	P	K	N	D	P	A	G	I	A	K	A	K	T	A	A	E	A	L	K	L	L	A	T	K	G	A	T	F	I	S	R	G	D	K	S	G	T	H	T	K	E	L	D	L	W	K	S	A	G	V	D	P	K	G	N	W	Y	V	E	A	G	Q	G	X	G	P	V	I	T	X	A	T	E	R
Template Known Secondary structure									T	T		T	T		G	G	G		S	S												T								S	S	S													T	T					S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		H	G	L	A	Y	L	P	Y	D	Q	V	E	R	A	I	K	E	K	K	L	I	R	V	L	D	K	F	T	P	D	L	P	G	Y	H	L	Y	Y	P	.	.	H	R	R	H	A	G	S	A	F	S	L	F	I	D	R	L
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		R	A	Y	T	L	T	D	R	G	T	Y	N	A	F	K	G	A	K	T	D	L	V	I	L	F	Q	G	L	F	N	P	Y	G	I	X	A	V	N	P	K	K	F	P	H	V	K	Y	D	L	A	X	K	L	I	D	Y	V
Template Known Secondary structure		T														B	T	T	T	B																				T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions