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Job DescriptionP77333
Confidence100.00%DateThu Jan 5 12:27:53 GMT 2012
Rank1Aligned Residues290
% Identity22%Templatec3hhgF_
PDB info PDB header:transcription regulatorChain: F: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga, a lysr-type transcriptional regulator from2 neisseria meningitidis.
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  REEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSAM
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Template Sequence  KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAE
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  ASLSDLQNRPSGTIRITTVEHAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGP
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Template Sequence  TEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFD
Template Known Secondary structure  TTS




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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  DIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHGLA
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Template Sequence  SRFRVIASPEYLAKHGTPQS. . . . TEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIV
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SS....GGGGGTS
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   162.......170.........180. ........190.........200.........210.........220.........230.......
 
   243......250.........260. ........270.........280.........290......
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Query Sequence  YLPYDQVERAIKEKKLIRV. LDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYK
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Template Sequence  CLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEE
Template Known Secondary structure  TSS

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   238.240.........250.........260.........270.........280.........290..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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