Job Description P77333 Confidence 99.69% Date Thu Jan 5 12:27:53 GMT 2012 Rank 33 Aligned Residues 203 % Identity 14% Template c2f7cA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:hth-type transcriptional regulator catm; PDBTitle: catm effector binding domain with its effector cis,cis-muconate Resolution 2.16 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		S	G	T	I	R	I	T	T	V	E	H	A	A	K	T	I	L	L	P	A	M	R	T	F	L	K	S	H	P	E	I	D	I	Q	L	T	I	D	Y	G	L	T	D	V	V	.	.	.	S	E	R	F	D	A	G	V	R	L	G	G	E	M	D	K	D	M	I	A	I	R	I	G	P	D	I	P	M	A	I	V
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		S	Q	T	L	R	I	G	Y	V	S	S	L	L	Y	G	L	L	P	E	I	I	Y	L	F	R	Q	Q	N	P	E	I	H	I	E	L	I	E	C	G	T	K	D	Q	I	N	A	L	K	Q	G	K	I	D	L	G	F	G	R	L	K	I	T	D	P	A	I	R	R	I	V	L	H	K	E	Q	L	K	L	A	I
Template Known Secondary structure											G	G	G	G	G	T	T													T	T	S																		T	T	S		S					S	S				B	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	P	D	Y	F	S	R	R	S	V	P	T	S	V	S	Q	L	I	D	H	Q	A	I	N	L	Y	L	P	T	S	G	T	A	N	R	W	R	L	I	R	G	G	R	E	V	R	V	R	M	E	G	Q	L	L	L	N	T	I	D	L	I	I	D	A	A	I	D	G	H	G	L	A	Y	L	P	Y	D	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K	H	H	H	P	N	Q	F	A	A	T	G	V	H	L	S	Q	I	I	D	E	P	M	L	L	Y	P	V	S	Q	K	P	N	F	A	T	F	I	Q	S	L	F	T	E	L	G	L	V	P	S	K	L	T	E	I	R	E	I	Q	L	A	L	G	L	V	A	A	G	E	G	V	C	I	V	P	A	S	A	M
Template Known Secondary structure			T	T	S		T	T	T	S		T	T		B		G	G	G	G	T	T	S								S	S	S	S	S											T	T	T				S						S	S											T	S							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	I	K	E	K	K	L	I	R	V	L	D	K	F	T	P	D	L	P	G	Y	H	L	Y	Y	P	H	R	R	H	A	G	S	A	F	S	L	F	I	D	R	L	K	Y	K	G	A
Query Conservation
Alig confidence					.	.																										.
Template Conservation					.	.																										.
Template Sequence		D	I	G	.	.	V	K	N	L	L	Y	I	P	I	L	D	D	D	A	Y	S	P	I	S	L	A	V	R	N	M	.	D	H	S	N	Y	I	P	K	I	L	A	C	V	Q	E	V	F	A
Template Known Secondary structure		G	S	S	.	.		S	S						B		S	T	T											T	T	.				T
Template Predicted Secondary structure					.	.																										.
Template SS confidence
		249	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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