Job Description P77333 Confidence 99.78% Date Thu Jan 5 12:27:53 GMT 2012 Rank 19 Aligned Residues 203 % Identity 14% Template c1al3A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:cys regulon transcriptional activator cysb; PDBTitle: cofactor binding fragment of cysb from klebsiella aerogenes Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		P	S	G	T	I	R	I	T	T	V	E	H	A	A	K	T	I	L	L	P	A	M	R	T	F	L	K	S	H	P	E	I	D	I	Q	L	T	I	D	Y	G	.	.	.	L	T	D	V	V	S	E	R	F	D	A	G	V	R	L	G	G	E	M	D	K	D	M	I	A	I	R	I	G	P	D	I	P	M	A	I
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		D	K	G	S	L	Y	V	A	T	T	H	T	Q	A	R	Y	A	L	P	G	V	I	K	G	F	I	E	R	Y	P	R	V	S	L	H	M	H	Q	G	S	P	T	Q	I	A	E	A	V	S	K	G	N	A	D	F	A	I	A	T	E	A	L	H	L	Y	D	D	L	V	M	L	P	C	Y	H	W	N	R	S	I
Template Known Secondary structure																		T	S												T																				T	T			S					S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	S	P	D	Y	F	S	R	R	S	V	P	T	S	V	S	Q	L	I	D	H	Q	A	I	N	L	Y	L	P	T	S	G	T	A	N	R	W	R	L	I	R	G	G	R	E	V	R	V	R	M	E	G	Q	L	L	L	N	T	I	D	L	I	I	D	A	A	I	D	G	H	G	L	A	Y	L	P	Y	D	Q
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		V	V	T	P	E	H	P	L	A	T	K	G	S	V	S	I	E	E	L	A	Q	Y	P	.	.	.	L	V	T	Y	T	F	G	F	T	G	R	S	E	L	D	T	A	F	N	R	A	G	L	T	P	R	I	V	F	T	A	T	D	A	D	V	I	K	T	Y	V	R	L	G	L	G	V	G	V	I	A	S	M	A
Template Known Secondary structure					T	T	S	T	T	T	T	T	S									T	S		.	.	.						T	T	S	T	T												T										S	S											T	S							G	G	G
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	A	I	K	E	K	K	L	I	R	V	L	D	K	F	T	P	D	L	P	G	Y	H	L	Y	Y	P	H	R	R	H	A	G	S	A	F	S	L	F	I	D	R	L	K	Y	K	G	A
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		V	.	D	P	V	S	D	P	D	L	V	K	L	D	A	N	G	I	F	S	H	S	T	T	K	I	G	F	R	R	S	T	F	L	R	S	Y	M	Y	D	F	I	Q	R	F	A	P	H	L	T
Template Known Secondary structure			.		T	T	T		T	T	S						B	T	T	B											T	T																T	T
Template Predicted Secondary structure			.
Template SS confidence
		248		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions