 |
| Job Description | A5A625 | | Confidence | 2.77% | Date | Thu Jan 5 10:55:29 GMT 2012 |
| Rank | 48 | Aligned Residues | 21 |
| % Identity | 29% | Template | c3qfqE_ |
| PDB info |
PDB header:dna binding protein/dna | Chain: E: PDB Molecule:large t antigen; |
PDBTitle: asymmetric assembly of merkel cell polyomavirus large t-antigen origin2 binding domains at the viral origin
|
| Resolution | 2.90 Å |
|
| | |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
| Predicted Secondary structure | |
 | |
|
|
|
|
|
|
|
|
|  | | | | | | |  |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | S | A | S | T | K | E | G | R | K | A | C | S | L | S | Y | F | A | C | K | A |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
| |
|
| | |
|
|
|
|
|
| |
|
|
|
| Template Sequence | |
V | S | A | I | K | N | F | C | S | T | F | C | T | I | S | F | L | I | C | K | G |
| Template Known Secondary structure | |
| | | | | | | | T | T | T |
| S | S | S |
|
| | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | |
| | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
381 | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
