Job Description P25527 Confidence 1.92% Date Thu Jan 5 11:41:58 GMT 2012 Rank 35 Aligned Residues 136 % Identity 10% Template c3rkoL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:nadh-quinone oxidoreductase subunit l; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	T	P	Y	V	A	V	L	L	S	T	G	A	A	F	L	T	V	V	V	N	Y	Y	A	P	A	K	V	F	K	F	L	I	D	S	S	G	A	I	A	L	L	V	Y	L	V	I	A	V	S	Q	L	R	M	R	K	I	L	R	A	E	G	S	E	I	R	L	R	M	W	L	Y	P	W	L	T	W	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	T	D	I	K	R	V	L	A	Y	S	T	M	S	Q	I	G	Y	M	F	L	A	L	G	V	Q	A	W	D	A	A	I	F	H	L	M	T	H	A	F	F	K	A	L	L	F	L	A	S	G	S	V	I	L	A	C	H	H	E	Q	N	I	F	K	M	G	G	L	R	K	S	I	P	L	V	Y	L	C	F
Template Known Secondary structure		T		S	B																						T	T																														T	T	S			B	S	T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.													.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	F	I	T	F	V	L	V	V	M	L	F	R	P	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	Q	L	E	V	I	S	T	G	L	L	A	I	G	I	I	C	T	V	P	I	M	A	R	W	K	K	L	V	L	W	Q	K	T	P	V	H	N	T	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	G	G	A	A	L	S	A	L	P	L	V	T	A	G	F	F	S	K	D	E	I	L	A	G	A	M	A	N	G	H	I	N	L	M	V	A	G	L	V	G	A	F	M	T	S	L	Y	T	F	R	M	I	F	I	V	F	H	G	K	E	Q	I	H	A	H	A
Template Known Secondary structure										T		S	S	S	B															T	T	T																												S	S				S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions