Return to main results Retrieve Phyre Job Id

Job DescriptionP25527
Confidence8.42%DateThu Jan 5 11:41:58 GMT 2012
Rank10Aligned Residues34
% Identity21%Templatec2k1aA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin alpha-iib; PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   428.430.........440.........450.........460.
Predicted Secondary structure 







Query SS confidence 

































Query Sequence  QLEVISTGLLAIGIICTVPIMARWKKLVLWQKTP
Query Conservation             
 
                    
Alig confidence 

































Template Conservation 
 







 




  

  


 




 

Template Sequence  PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRP
Template Known Secondary structure 
TTTT




Template Predicted Secondary structure 




Template SS confidence 

































   965....970.........980.........990........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions