Job Description P52094 Confidence 2.74% Date Thu Jan 5 12:05:13 GMT 2012 Rank 28 Aligned Residues 86 % Identity 9% Template c3qnqD_ PDB info PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system Resolution 3.29 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	P	S	M	M	R	Y	A	L	P	G	I	G	N	N	W	Q	V	I	L	K	S	T	A	L	V	S	L	L	G	L	E	D	V	V	K	A	T	Q	L	A	G	K	S	T	W	E	P	F	Y	F	A	I	V	C	G	V	I	Y	L	V	F	T	T	V	S	N	G	V	L	L	F	L	E	R	R	Y	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	P	F	I	V	V	P	V	V	L	T	I	V	S	Y	F	A	M	E	W	G	L	V	A	R	P	S	G	A	A	V	T	W	T	T	P	I	L	F	S	G	Y	L	G	S	G	G	K	I	S	G	V	I	L	Q	L	V	N	F	A	L	A	F	V	I	Y	L	P	F	L	K	I	W	D	K	Q	K	I	A
Template Known Secondary structure																						T	T	S	S					S					T	T	S									T	T	T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		222	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	K	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	K	G	E	A
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions