Job Description P52094 Confidence 1.26% Date Thu Jan 5 12:05:13 GMT 2012 Rank 67 Aligned Residues 176 % Identity 13% Template c3k07A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa Resolution 3.52 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	A	L	V	T	L	E	L	A	I	S	S	V	V	L	A	V	I	I	G	L	I	G	A	G	G	K	L	S	Q	N	R	L	S	G	L	I	F	E	G	Y	T	T	L	I	R	G	V	P	D	L	V	L	M	L	L	I	F	Y	G	L	Q	I	A	L	N	T	V	T	E	A	M	G	V	G	Q	I	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	N	L	S	G	K	L	L	E	E	F	I	V	V	A	V	V	C	A	L	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	W	H	V	R	S	A	L	V	A	I	I	S	L	P	L	G	L	C	I	A	F	I	V	M	H	F	Q	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.											T																	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.														.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		I	D	P	M	V	A	G	I	I	T	L	G	F	I	Y	G	A	Y	F	T	E	T	F	R	G	A	F	M	A	V	P	K	G	H	I	E	.	.	.	.	.	.	A	A	T	A	F	G	F	T	R	G	Q	V	F	R	R	I	M	F	P	S	M	M	R	Y	A	L	P	G	I	G	N	N	W	Q	V	I	L	K
Query Conservation																																						.	.	.	.	.	.
Alig confidence		.	.																																			.	.	.	.	.	.																																			.	.	.	.
Template Conservation		.	.																																																																											.	.	.	.
Template Sequence		.	.	N	A	N	I	M	S	L	G	G	I	A	I	A	V	G	A	M	V	D	A	A	I	V	M	I	E	N	A	H	K	R	L	E	E	W	Q	H	Q	H	P	D	A	T	L	D	N	K	T	R	W	Q	V	I	T	D	A	S	V	E	V	G	P	A	L	F	I	S	L	L	I	I	T	L	S	.	.	.	.
Template Known Secondary structure		.	.																																							S		S	S																		S															.	.	.	.
Template Predicted Secondary structure		.	.																																																																											.	.	.	.
Template SS confidence
				387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	A	L	V	S	L	L	G	L	E	D	V	V	K	A	T	Q	L	A	G	K	S	T	W	E	P	F	Y	F	A	I	V	C	G	V	I	Y	L	V	F	T	T	V	S	N	G	V	L	L	F	L	E	R	R	Y	S	V	G	V	K	R
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	F	I	P	I	F	T	L	E	G	Q	E	G	R	L	F	G	P	L	A	F	T	K	T	Y	A	M	A	G	A	A	L	L	A	I	V	V	I	P	I	L	M	G	Y	W	P	L	N	R	F	L	I	R	V	Y	H	P
Template Known Secondary structure		.	.	.	.	.	.		G	G	G	G	G																														T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions