Return to main results Retrieve Phyre Job Id

Job DescriptionP52094
Confidence1.03%DateThu Jan 5 12:05:13 GMT 2012
Rank90Aligned Residues85
% Identity12%Templatec2nq2A_
PDB info PDB header:metal transportChain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160....... ..170.........180.........190.........200.......
Predicted Secondary structure  ......



Query SS confidence 

































. . . . . .







































Query Sequence  RGQVFRRIMFPSMMRYALPGIGNNWQVILKSTAL. . . . . . VSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTV
Query Conservation         



   
 
                 ......                              
 
  
    
Alig confidence 

































......







































Template Conservation     

   



 
 
 
 
  
  

 
 
 
 




 
  


 


 
                            
Template Sequence  QQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLA
Template Known Secondary structure  TTT
TT

TTTTSTT

Template Predicted Secondary structure 






Template SS confidence 















































































   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   208.210........
Predicted Secondary structure 
Query SS confidence 










Query Sequence  SNGVLLFLERR
Query Conservation     
   
  
Alig confidence 










Template Conservation 
          
Template Sequence  LVFLFSFKSLL
Template Known Secondary structure  T

Template Predicted Secondary structure 


Template SS confidence 










   134.....140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions